DMR 41033 chr16:30565351-30565500 (150bp)
| DMR Stats | |
|---|---|
| Position | chr16:30565351-30565500 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | ZNF764 (0bp away) |
| ANODEV p-value | 0.000243178877673 |
| Frequencies | Benign: 1.0 (14.29%), Low: 0.0 (0.0%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41033 | ZNF764 | 11272 | uc002dyq.3 | chr16 | 30565085 | 30569642 | - | 150 | 100.0 | 0.07 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
| 41033 | ZNF764 | 11272 | uc002dyr.2 | chr16 | 30565085 | 30569642 | - | 150 | 100.0 | 0.16 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100) | 100.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 41033 | chr16 | 30565495 | 30566130 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:239, expCount:1, expNums:616, expScores:239, srow:1510920 |
| 41033 | chr16 | 30564443 | 30566442 | cpgShore | — | values(x.gr)[overs$srow, ]:16634 |
- 2 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 41033 | cellmeth_recounts | PrEC: 1, LNCaP: 6, DU145: 3 |  |
| 41033 | cellexp | id=ENSG00000169951, name=ZNF764, PrEC=392, str=274, LNCaP=772, str=561, DU145=451, str=457 |  |
| 41033 | cellexp | id=ENSG00000260869, name=AC002310.13, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 41033 | tcgameth | site:cg07905568, B=0.79, L=0.85, H=0.82 |  |
| 41033 | tcgaexp | gene=ZNF764, entrez=92595, pos=chr16:30565085-30569642(-), B=459, L=509, M=536, H=626 |  |
| 41033 | pubmed | gene=ZNF764, G=1, GP=0, GC=0, GM=0, GPM=0, GCM=0 |  |