DMR 41087 chr17:692801-693000 (200bp)

DMR Stats
Positionchr17:692801-693000 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesRNMTL1 (0bp away)
ANODEV p-value0.00148468970066
FrequenciesBenign: 1.0 (14.29%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
41087 RNMTL1 11887 uc002frw.3 chr17 685513 695741 + 200 100.0 0.1 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
41087 chr17 692840 692852 phastConsElements100way lod=33 score:340, srow:3520308
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
41087 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 1
41087 cellexp id=ENSG00000171861, name=RNMTL1, PrEC=965, str=485, LNCaP=1634, str=1944, DU145=1161, str=1377
41087 cellexp id=ENSG00000262434, name=RP11-676J12.8, PrEC=8, str=28, LNCaP=4, str=5, DU145=29, str=37
41087 tcgaexp gene=NSF, entrez=4905, pos=chr17:266212-44834828(+), B=3355, L=5678, M=5410, H=5700
41087 tcgaexp gene=PLEKHM1, entrez=9842, pos=chr17:128328-43568146(-), B=1993, L=1631, M=1589, H=1418
41087 tcgaexp gene=LRRC37A, entrez=9884, pos=chr17:415627-44415160(+), B=924, L=896, M=971, H=940
41087 tcgaexp gene=ARL17A, entrez=51326, pos=chr17:195721-44657088(-), B=200, L=195, M=210, H=230
41087 tcgaexp gene=LRRC37A4P, entrez=55073, pos=chr17:197706-43597889(-), B=1015, L=1512, M=1396, H=1450
41087 tcgaexp gene=RNMTL1, entrez=55178, pos=chr17:685513-695741(+), B=817, L=1068, M=986, H=777
41087 tcgaexp gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486
41087 tcgaexp gene=KANSL1, entrez=284058, pos=chr17:563498-44302740(-), B=3141, L=2594, M=2797, H=3017
41087 tcgaexp gene=LRRC37A2, entrez=474170, pos=chr17:197706-44633014(+), B=351, L=310, M=361, H=377