DMR 41803 chr19:30866351-30866600 (250bp)

DMR Stats
Positionchr19:30866351-30866600 (View on UCSC)
Width250bp
Genomic Contextintron
Nearest GenesZNF536 (0bp away)
ANODEV p-value0.00120415305191
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
41803 ZNF536 14877 uc002nsu.1 chr19 30863328 31048965 + 250 100.0 1.11 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
41803 ZNF536 14877 uc010edd.1 chr19 30863328 31048965 + 250 100.0 0.83 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
41803 chr19 30866386 30866815 wgEncodeRegDnaseClusteredV2 7 score:134, srow:573736
41803 chr19 30865454 30866363 wgEncodeRegTfbsClusteredV3 EZH2 score:268, expCount:1, expNums:6, expScores:268, srow:1997512
41803 chr19 30865684 30866490 cpgIsland CpG: 79 length:807, cpgNum:79, gcNum:478, perCpg:19.6, perGc:59.2, obsExp:1.12, srow:13433
41803 chr19 30866491 30868490 cpgShore — values(x.gr)[overs$srow, ]:24230
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
41803 cellmeth_recounts PrEC: 5, LNCaP: 349, DU145: 26
41803 cellmeth_diffreps_PrECvsLNCaP A=36, B=740, Length=1320, Event=Up, log2FC=4.36, padj=0
41803 cellmeth_diffreps_LNCaPvsDU145 A=787.89, B=75.77, Length=1180, Event=Down, log2FC=-3.38, padj=0
41803 cellexp id=ENSG00000198597, name=ZNF536, PrEC=0, str=2, LNCaP=0, str=0, DU145=0, str=0
41803 tcgameth site:cg23642130, B=0.05, L=0.16, H=0.14
41803 tcgaexp gene=ZNF536, entrez=9745, pos=chr19:30863328-31048965(+), B=180, L=58, M=66, H=52