DMR 41934 chr19:53633851-53634000 (150bp)

DMR Stats
Positionchr19:53633851-53634000 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesZNF415 (0bp away)
ANODEV p-value0.00498464918173
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
41934 ZNF415 15683 uc002qau.3 chr19 53611132 53636171 - 150 100.0 0.16 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
41934 ZNF415 15683 uc002qav.3 chr19 53611132 53636171 - 150 100.0 1.37 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
41934 ZNF415 15683 uc002qaw.3 chr19 53611132 53636173 - 150 100.0 0.46 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
41934 ZNF415 15683 uc002qax.3 chr19 53611132 53636173 - 150 100.0 0.07 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
41934 ZNF415 15683 uc002qay.3 chr19 53611132 53636173 - 150 100.0 0.07 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
41934 ZNF415 15683 uc002qaz.3 chr19 53611132 53636173 - 150 100.0 0.07 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
41934 ZNF415 15683 uc002qba.3 chr19 53611132 53636173 - 150 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0) 0.0
41934 ZNF415 15683 uc010yds.2 chr19 53611132 53636171 - 150 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
41934 ZNF415 15683 uc010ydt.2 chr19 53611132 53636171 - 150 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
  • 9 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
41934 chr19 53633881 53634110 wgEncodeRegDnaseClusteredV2 6 score:243, srow:589353
41934 chr19 53633626 53635625 cpgShore — values(x.gr)[overs$srow, ]:25776
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
41934 cellmeth_recounts PrEC: 0, LNCaP: 5, DU145: 3
41934 cellexp id=ENSG00000170954, name=ZNF415, PrEC=232, str=530, LNCaP=789, str=778, DU145=32, str=22
41934 cellexp id=ENSG00000197937, name=ZNF347, PrEC=481, str=627, LNCaP=489, str=813, DU145=435, str=396
41934 tcgaexp gene=ZNF415, entrez=55786, pos=chr19:53611132-53636173(-), B=784, L=538, M=535, H=523