DMR 41935 chr19:53893451-53893650 (200bp)
| DMR Stats | |
|---|---|
| Position | chr19:53893451-53893650 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | ZNF765 (0bp away) |
| ANODEV p-value | 0.00298999981614 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41935 | ZNF765 | 15693 | uc010ydx.2 | chr19 | 53868968 | 53915262 | + | 200 | 100.0 | 0.06 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 41935 | chr19 | 53893281 | 53893655 | wgEncodeRegDnaseClusteredV2 | 18 | score:841, srow:589467 |
| 41935 | chr19 | 53893420 | 53893939 | wgEncodeRegTfbsClusteredV3 | SIN3A | score:234, expCount:1, expNums:357, expScores:234, srow:2072699 |
| 41935 | chr19 | 53893624 | 53893631 | phastConsElements100way | lod=17 | score:274, srow:4349200 |
- 3 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 41935 | cellmeth_recounts | PrEC: 2, LNCaP: 3, DU145: 4 |  |
| 41935 | cellexp | id=ENSG00000196417, name=ZNF765, PrEC=693, str=919, LNCaP=826, str=1335, DU145=491, str=504 |  |
| 41935 | cellexp | id=ENSG00000203326, name=ZNF525, PrEC=754, str=1280, LNCaP=1016, str=1294, DU145=516, str=596 |  |
| 41935 | tcgaexp | gene=ZNF765, entrez=91661, pos=chr19:53868968-53930574(+), B=712, L=871, M=814, H=853 |  |