DMR 41948 chr19:55986301-55986500 (200bp)

DMR Stats
Positionchr19:55986301-55986500 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesZNF628 (1198bp away)
ANODEV p-value5.04851130267e-05
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
41948 chr19 55986266 55986635 wgEncodeRegDnaseClusteredV2 41 score:1000, srow:590997
41948 chr19 55986390 55986673 wgEncodeRegTfbsClusteredV3 POLR2A score:137, expCount:1, expNums:599, expScores:137, srow:2079249
41948 chr19 55985545 55987544 cpgShore — values(x.gr)[overs$srow, ]:25945
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
41948 cellmeth_recounts PrEC: 1, LNCaP: 20, DU145: 5
41948 pubmed gene=ZNF628, G=1, GP=0, GC=0, GM=0, GPM=0, GCM=0