DMR 42458 chr22:46403651-46403800 (150bp)

DMR Stats
Positionchr22:46403651-46403800 (View on UCSC)
Width150bp
Genomic Contextexon
Nearest GenesLOC730668 (0bp away)
ANODEV p-value0.0280556663673
FrequenciesBenign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
42458 LOC730668 19655 uc011aqu.1 chr22 46402496 46406657 + 150 100.0 0.03 0 0.0 E1 (100) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
42458 chr22 46403646 46404095 wgEncodeRegDnaseClusteredV2 93 score:1000, srow:777292
42458 chr22 46402809 46404290 wgEncodeRegTfbsClusteredV3 POLR2A score:972, expCount:16, expNums:62,78,163,168,206,256,259,275,402,403,563,564,599,613,632,637, expScores:245,487,557,972,171,173,286,248,379,308,222,211,166,217,274,117, srow:2708280
42458 chr22 46403234 46404244 wgEncodeRegTfbsClusteredV3 SMARCB1 score:209, expCount:1, expNums:391, expScores:183, srow:2708298
42458 chr22 46403660 46404115 wgEncodeRegTfbsClusteredV3 GTF2F1 score:176, expCount:1, expNums:389, expScores:176, srow:2708301
42458 chr22 46403664 46404343 wgEncodeRegTfbsClusteredV3 SMARCA4 score:154, expCount:1, expNums:377, expScores:154, srow:2708302
42458 chr22 46403666 46404195 wgEncodeRegTfbsClusteredV3 TFAP2A score:154, expCount:1, expNums:369, expScores:154, srow:2708303
42458 chr22 46403669 46404143 wgEncodeRegTfbsClusteredV3 TAF1 score:167, expCount:2, expNums:169,261, expScores:114,167, srow:2708304
42458 chr22 46403683 46404146 wgEncodeRegTfbsClusteredV3 MAZ score:251, expCount:1, expNums:396, expScores:251, srow:2708305
42458 chr22 46403698 46404213 wgEncodeRegTfbsClusteredV3 TFAP2C score:245, expCount:1, expNums:370, expScores:245, srow:2708306
42458 chr22 46403702 46404057 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:207, expCount:1, expNums:260, expScores:207, srow:2708307
42458 chr22 46403710 46404033 wgEncodeRegTfbsClusteredV3 REST score:634, expCount:3, expNums:257,258,274, expScores:634,212,194, srow:2708308
42458 chr22 46403721 46404090 wgEncodeRegTfbsClusteredV3 CHD2 score:299, expCount:1, expNums:380, expScores:299, srow:2708309
42458 chr22 46403746 46404085 wgEncodeRegTfbsClusteredV3 JUN score:173, expCount:1, expNums:381, expScores:173, srow:2708310
42458 chr22 46403756 46404085 wgEncodeRegTfbsClusteredV3 RFX5 score:154, expCount:1, expNums:406, expScores:154, srow:2708311
42458 chr22 46403760 46404075 wgEncodeRegTfbsClusteredV3 STAT3 score:166, expCount:4, expNums:566,567,568,569, expScores:146,122,131,166, srow:2708312
42458 chr22 46403761 46404024 wgEncodeRegTfbsClusteredV3 CEBPB score:481, expCount:1, expNums:378, expScores:481, srow:2708313
42458 chr22 46403761 46404064 wgEncodeRegTfbsClusteredV3 BRCA1 score:177, expCount:1, expNums:374, expScores:177, srow:2708314
42458 chr22 46403783 46403891 wgEncodeRegTfbsClusteredV3 YY1 score:549, expCount:1, expNums:266, expScores:549, srow:2708315
42458 chr22 46403795 46404044 wgEncodeRegTfbsClusteredV3 NR3C1 score:292, expCount:1, expNums:77, expScores:292, srow:2708316
42458 chr22 46403797 46404192 wgEncodeRegTfbsClusteredV3 MAX score:200, expCount:1, expNums:395, expScores:200, srow:2708317
42458 chr22 46403797 46404172 wgEncodeRegTfbsClusteredV3 TBP score:141, expCount:1, expNums:412, expScores:141, srow:2708318
  • 21 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
42458 cellmeth_recounts PrEC: 0, LNCaP: 4, DU145: 1
42458 tcgaexp gene=LOC730668, entrez=730668, pos=chr22:46402496-46406657(+), B=9, L=7, M=10, H=33