DMR 42461 chr22:46460351-46460550 (200bp)
| DMR Stats | |
|---|---|
| Position | chr22:46460351-46460550 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | MIRLET7BHG (0bp away) |
| ANODEV p-value | 0.00124096681777 |
| Frequencies | Benign: 0.0 (0.0%), Low: 1.0 (16.67%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42461 | MIRLET7BHG | 19658 | uc003bgr.4 | chr22 | 46449726 | 46501901 | + | 200 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 42461 | chr22 | 46460346 | 46461310 | wgEncodeRegDnaseClusteredV2 | 40 | score:1000, srow:777362 |
| 42461 | chr22 | 46460337 | 46460860 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:336, expCount:1, expNums:275, expScores:336, srow:2708608 |
| 42461 | chr22 | 46460384 | 46460793 | wgEncodeRegTfbsClusteredV3 | GATA2 | score:961, expCount:1, expNums:586, expScores:961, srow:2708609 |
| 42461 | chr22 | 46460404 | 46460719 | wgEncodeRegTfbsClusteredV3 | EP300 | score:227, expCount:1, expNums:263, expScores:227, srow:2708610 |
| 42461 | chr22 | 46460469 | 46460998 | wgEncodeRegTfbsClusteredV3 | TFAP2A | score:122, expCount:1, expNums:369, expScores:122, srow:2708611 |
| 42461 | chr22 | 46460475 | 46460990 | wgEncodeRegTfbsClusteredV3 | TFAP2C | score:229, expCount:1, expNums:370, expScores:229, srow:2708612 |
| 42461 | chr22 | 46460481 | 46460776 | wgEncodeRegTfbsClusteredV3 | GATA3 | score:367, expCount:1, expNums:272, expScores:367, srow:2708613 |
| 42461 | chr22 | 46460505 | 46460780 | wgEncodeRegTfbsClusteredV3 | ESR1 | score:166, expCount:2, expNums:269,270, expScores:166,166, srow:2708614 |
| 42461 | chr22 | 46460029 | 46463976 | cpgShelf | — | values(x.gr)[overs$srow, ]:27160 |
- 9 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 42461 | cellmeth_recounts | PrEC: 10, LNCaP: 0, DU145: 3 |  |
| 42461 | cellmeth_diffreps_PrECvsLNCaP | A=15, B=0, Length=300, Event=Down, log2FC=-Inf, padj=0.000225236251108575 |  |
| 42461 | cellexp | id=ENSG00000197182, name=FLJ27365, PrEC=796, str=2165, LNCaP=235, str=122, DU145=46, str=49 |  |
| 42461 | tcgaexp | gene=MIRLET7BHG, entrez=400931, pos=chr22:46449726-46509808(+), B=143, L=104, M=173, H=152 |  |