DMR 42493 chr22:50749501-50749700 (200bp)
| DMR Stats | |
|---|---|
| Position | chr22:50749501-50749700 (View on UCSC) |
| Width | 200bp |
| Genomic Context | 3' end |
| Nearest Genes | DENND6B (691bp away) |
| ANODEV p-value | 0.00501688572564 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 42493 | chr22 | 50749214 | 50749589 | wgEncodeRegTfbsClusteredV3 | YY1 | score:138, expCount:1, expNums:203, expScores:138, srow:2715369 |
| 42493 | chr22 | 50749373 | 50749792 | wgEncodeRegTfbsClusteredV3 | TAF1 | score:262, expCount:1, expNums:199, expScores:262, srow:2715370 |
| 42493 | chr22 | 50749382 | 50749801 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:377, expCount:1, expNums:192, expScores:377, srow:2715371 |
| 42493 | chr22 | 50749627 | 50749962 | wgEncodeRegTfbsClusteredV3 | SP1 | score:185, expCount:1, expNums:196, expScores:185, srow:2715372 |
| 42493 | chr22 | 50749649 | 50749908 | wgEncodeRegTfbsClusteredV3 | HNF4A | score:247, expCount:1, expNums:182, expScores:247, srow:2715373 |
| 42493 | chr22 | 50748126 | 50750125 | cpgShelf | — | values(x.gr)[overs$srow, ]:27346 |
- 6 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 42493 | cellmeth_recounts | PrEC: 24, LNCaP: 21, DU145: 5 |  |
| 42493 | cellmeth_diffreps_PrECvsDU145 | A=36, B=4, Length=400, Event=Down, log2FC=-3.17, padj=4.55515183547576e-06 |  |
| 42493 | cellexp | id=ENSG00000205593, name=DENND6B, PrEC=89, str=313, LNCaP=709, str=150, DU145=211, str=170 |  |
| 42493 | tcgameth | site:cg06639496, B=0.79, L=0.78, H=0.78 |  |