DMR 42514 chrX:15720751-15720900 (150bp)
| DMR Stats | |
|---|---|
| Position | chrX:15720751-15720900 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | CA5BP1 (0bp away) |
| ANODEV p-value | 0.00137887821529 |
| Frequencies | Benign: 2.0 (28.57%), Low: 2.0 (33.33%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42514 | CA5BP1 | 30576 | uc011mir.1 | chrX | 15693039 | 15721474 | + | 150 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0) | 100.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 42514 | cellmeth_recounts | PrEC: 1, LNCaP: 0, DU145: 0 |  |
| 42514 | cellexp | id=ENSG00000169239, name=CA5B, PrEC=290, str=279, LNCaP=291, str=388, DU145=206, str=200 |  |
| 42514 | cellexp | id=ENSG00000186312, name=CA5BP1, PrEC=548, str=407, LNCaP=576, str=575, DU145=479, str=334 |  |
| 42514 | tcgaexp | gene=CA5BP1, entrez=340591, pos=chrX:15693039-15721474(+), B=453, L=430, M=448, H=542 |  |