DMR 42542 chrX:106695051-106695200 (150bp)
| DMR Stats | |
|---|---|
| Position | chrX:106695051-106695200 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intergenic |
| Nearest Genes | KIAA1817 (148434bp away) |
| ANODEV p-value | 0.000927028160335 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 42542 | chrX | 106695041 | 106695355 | wgEncodeRegDnaseClusteredV2 | 14 | score:330, srow:1271652 |
| 42542 | chrX | 106695124 | 106695137 | tfbsConsSites | V$ATF_01 | score:872, zScore:2.5, srow:5695210 |
| 42542 | chrX | 106695126 | 106695140 | tfbsConsSites | V$TAXCREB_01 | score:818, zScore:2.43, srow:5695211 |
| 42542 | chrX | 106695127 | 106695134 | tfbsConsSites | V$ATF6_01 | score:909, zScore:2.29, srow:5695212 |
| 42542 | chrX | 106695138 | 106695152 | tfbsConsSites | V$SPZ1_01 | score:875, zScore:1.86, srow:5695213 |
| 42542 | chrX | 106695172 | 106695193 | tfbsConsSites | V$HEN1_01 | score:774, zScore:1.69, srow:5695214 |
| 42542 | chrX | 106695192 | 106695204 | tfbsConsSites | V$MZF1_02 | score:902, zScore:2.48, srow:5695215 |
| 42542 | chrX | 106695193 | 106695205 | tfbsConsSites | V$SP1_Q6 | score:925, zScore:2.05, srow:5695216 |
| 42542 | chrX | 106695060 | 106695073 | phastConsElements100way | lod=17 | score:274, srow:9899290 |
| 42542 | chrX | 106695084 | 106695161 | phastConsElements100way | lod=101 | score:450, srow:9899291 |
| 42542 | chrX | 106695167 | 106695172 | phastConsElements100way | lod=19 | score:285, srow:9899292 |
| 42542 | chrX | 106695182 | 106695195 | phastConsElements100way | lod=25 | score:312, srow:9899293 |
| 42542 | chrX | 106693762 | 106695761 | cpgShore | — | values(x.gr)[overs$srow, ]:51037 |
- 13 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 42542 | cellmeth_recounts | PrEC: 3, LNCaP: 39, DU145: 0 |  |
| 42542 | cellmeth_diffreps_PrECvsLNCaP | A=5, B=32, Length=360, Event=Up, log2FC=2.68, padj=0.000127968816009697 |  |
| 42542 | cellmeth_diffreps_LNCaPvsDU145 | A=34.21, B=0, Length=400, Event=Down, log2FC=-Inf, padj=2.22841386021545e-09 |  |
| 42542 | tcgaexp | gene=IL9R, entrez=3581, pos=chrX:59330252-155240482(+), B=6, L=4, M=6, H=9 |  |
| 42542 | tcgaexp | gene=VAMP7, entrez=6845, pos=chrX:59213949-155173433(+), B=2541, L=2446, M=2565, H=2891 |  |
| 42542 | tcgaexp | gene=SPRY3, entrez=10251, pos=chrX:59100457-155012117(+), B=156, L=117, M=100, H=75 |  |