DMR 42927 chr1:246941301-246941450 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:246941301-246941450 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | LOC149134 (0bp away) |
| ANODEV p-value | 0.00575346459521 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42927 | LOC149134 | 2805 | uc001ibs.1 | chr1 | 246939315 | 246955685 | + | 150 | 100.0 | 4.0 | 1 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 42927 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 4 |  |
| 42927 | cellexp | id=ENSG00000223519, name=KIF28P, PrEC=2, str=2, LNCaP=25, str=21, DU145=13, str=16 |  |
| 42927 | cellexp | id=ENSG00000227953, name=RP11-439E19.3, PrEC=0, str=5, LNCaP=88, str=77, DU145=15, str=17 |  |
| 42927 | tcgaexp | gene=LOC149134, entrez=149134, pos=chr1:246939315-246955685(+), B=61, L=93, M=114, H=179 |  |