DMR 448 chr1:146562151-146562350 (200bp)

DMR Stats
Positionchr1:146562151-146562350 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesNBPF13P (8715bp away)
ANODEV p-value0.0158875070924
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 2.0 (22.22 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
448 cellmeth_recounts PrEC: 4, LNCaP: 0, DU145: 33
448 cellmeth_diffreps_PrECvsLNCaP A=24, B=3, Length=260, Event=Down, log2FC=-3, padj=0.000654084762791137
448 cellmeth_diffreps_PrECvsDU145 A=0, B=27, Length=420, Event=Up, log2FC=Inf, padj=9.26891362789191e-08
448 cellmeth_diffreps_LNCaPvsDU145 A=6.41, B=80.45, Length=880, Event=Up, log2FC=3.65, padj=0
448 cellexp id=ENSG00000227242, name=NBPF13P, PrEC=15, str=32, LNCaP=9, str=3, DU145=3, str=4
448 tcgaexp gene=NBPF9, entrez=400818, pos=chr1:144146811-148346929(-), B=433, L=627, M=621, H=693
448 tcgaexp gene=PPIAL4B, entrez=653505, pos=chr1:144363462-149553787(-), B=0, L=0, M=0, H=0
448 tcgaexp gene=LINC00623, entrez=728855, pos=chr1:144300512-149616786(-), B=727, L=966, M=1062, H=1250
448 tcgaexp gene=GPR89C, entrez=728932, pos=chr1:145883868-147465755(+), B=144, L=216, M=221, H=229
448 tcgaexp gene=PDZK1P1, entrez=728939, pos=chr1:145924388-147484331(-), B=12, L=18, M=14, H=12
448 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305