DMR Stats | |
---|---|
Position | chr1:147801451-147801600 (View on UCSC) |
Width | 150bp |
Genomic Context | promoter |
Nearest Genes | NBPF8, BC041003 (0bp away) |
ANODEV p-value | 0.00745451624353 |
Frequencies | Benign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 7.0 (77.78 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
453 | NBPF8 | 1538 | uc001eqe.3 | chr1 | 147574323 | 148346791 | - | 150 | 100.0 | 0.68 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (100), E13 (0), I13 (0), E14 (0) | 0.0 |
453 | NBPF8 | 1538 | uc001eqf.4 | chr1 | 147574323 | 148346929 | - | 150 | 100.0 | 0.61 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (100), E19 (0), I19 (0), E20 (0) | 0.0 |
453 | NBPF8 | 1538 | uc001eqg.3 | chr1 | 147574323 | 148346929 | - | 150 | 100.0 | 0.55 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0) | 0.0 |
453 | BC041003 | 1548 | uc001eqk.1 | chr1 | 147801124 | 147816764 | + | 150 | 100.0 | 0.41 | 1 | 100.0 | E1 (24.67), I1 (76), E2 (0), I2 (0), E3 (0) | 0.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
453 | chr1 | 147801501 | 147801735 | wgEncodeRegDnaseClusteredV2 | 2 | score:156, srow:68915 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
453 | cellmeth_recounts | PrEC: 0, LNCaP: 1, DU145: 18 | |
453 | cellmeth_diffreps_PrECvsDU145 | A=0, B=23, Length=340, Event=Up, log2FC=Inf, padj=1.37590364676336e-06 | |
453 | cellmeth_diffreps_LNCaPvsDU145 | A=1.07, B=36.48, Length=580, Event=Up, log2FC=5.09, padj=2.72503927896912e-08 | |
453 | cellexp | id=ENSG00000224481, name=RP11-495P10.3, PrEC=0, str=2, LNCaP=9, str=5, DU145=3, str=3 | |
453 | tcgaexp | gene=NBPF9, entrez=400818, pos=chr1:144146811-148346929(-), B=433, L=627, M=621, H=693 | |
453 | tcgaexp | gene=PPIAL4B, entrez=653505, pos=chr1:144363462-149553787(-), B=0, L=0, M=0, H=0 | |
453 | tcgaexp | gene=LINC00623, entrez=728855, pos=chr1:144300512-149616786(-), B=727, L=966, M=1062, H=1250 | |
453 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |