DMR 47413 chr1:2899151-2899300 (150bp)

DMR Stats
Positionchr1:2899151-2899300 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesACTRT2 (38745bp away)
ANODEV p-value0.0153979058739
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47413 chr1 2898966 2899155 wgEncodeRegDnaseClusteredV2 2 score:278, srow:2048
47413 chr1 2899206 2899475 wgEncodeRegDnaseClusteredV2 4 score:228, srow:2049
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
47413 cellmeth_recounts PrEC: 60, LNCaP: 0, DU145: 3
47413 cellmeth_diffreps_PrECvsLNCaP A=94, B=0, Length=520, Event=Down, log2FC=-Inf, padj=0
47413 cellmeth_diffreps_PrECvsDU145 A=93, B=5, Length=480, Event=Down, log2FC=-4.22, padj=0
47413 tcgameth site:cg10226013, B=0.85, L=0.79, H=0.79
47413 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
47413 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305