DMR 47414 chr1:2934601-2934750 (150bp)

DMR Stats
Positionchr1:2934601-2934750 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesACTRT2 (3295bp away)
ANODEV p-value0.0157059391962
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47414 chr1 2934606 2934775 wgEncodeRegDnaseClusteredV2 4 score:206, srow:2076
47414 chr1 2934634 2936633 cpgShelf — values(x.gr)[overs$srow, ]:234
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
47414 cellmeth_recounts PrEC: 41, LNCaP: 0, DU145: 5
47414 cellmeth_diffreps_PrECvsLNCaP A=62, B=0, Length=460, Event=Down, log2FC=-Inf, padj=0
47414 cellmeth_diffreps_PrECvsDU145 A=62, B=4, Length=460, Event=Down, log2FC=-3.95, padj=7.44857156086637e-13
47414 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
47414 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305