DMR 47597 chr1:159111351-159111550 (200bp)

DMR Stats
Positionchr1:159111351-159111550 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesTRNA, TRNA_Arg (0bp away)
ANODEV p-value0.000223910700188
FrequenciesBenign: 5.0 (71.43%), Low: 5.0 (83.33%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
47597 TRNA 1931 uc021pbo.1 chr1 159111401 159111474 - 74 37.0 0.06 1 100.0 E1 (37) 100.0
47597 TRNA_Arg 1931 uc021pbp.1 chr1 159111401 159111474 - 74 37.0 0.11 1 100.0 E1 (37) 100.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
47597 chr1 159111306 159111690 wgEncodeRegDnaseClusteredV2 60 score:640, srow:75295
47597 chr1 159111227 159111682 wgEncodeRegTfbsClusteredV3 RPC155 score:520, expCount:2, expNums:407,531, expScores:272,520, srow:274257
47597 chr1 159111314 159111673 wgEncodeRegTfbsClusteredV3 TBP score:958, expCount:3, expNums:359,452,545, expScores:958,233,655, srow:274258
47597 chr1 159111323 159111543 wgEncodeRegTfbsClusteredV3 ATF3 score:650, expCount:1, expNums:45, expScores:650, srow:274259
47597 chr1 159111335 159111663 wgEncodeRegTfbsClusteredV3 REST score:250, expCount:3, expNums:257,258,274, expScores:185,244,250, srow:274260
47597 chr1 159111378 159111633 wgEncodeRegTfbsClusteredV3 CEBPB score:296, expCount:1, expNums:462, expScores:296, srow:274261
47597 chr1 159111388 159111935 wgEncodeRegTfbsClusteredV3 TCF7L2 score:303, expCount:2, expNums:367,573, expScores:303,272, srow:274262
47597 chr1 159111453 159111776 wgEncodeRegTfbsClusteredV3 SP1 score:261, expCount:1, expNums:153, expScores:261, srow:274263
47597 chr1 159111353 159111365 tfbsConsSites V$TCF11_01 score:922, zScore:1.86, srow:321721
47597 chr1 159111359 159111387 tfbsConsSites V$MYOGNF1_01 score:750, zScore:1.93, srow:321722
47597 chr1 159111361 159111383 tfbsConsSites V$OCT1_04 score:798, zScore:1.78, srow:321723
47597 chr1 159111379 159111398 tfbsConsSites V$ARNT_02 score:782, zScore:1.82, srow:321724
47597 chr1 159111379 159111398 tfbsConsSites V$MYCMAX_03 score:779, zScore:1.68, srow:321725
47597 chr1 159111389 159111402 tfbsConsSites V$USF_02 score:935, zScore:2.17, srow:321726
47597 chr1 159111391 159111401 tfbsConsSites V$SREBP1_01 score:878, zScore:2.12, srow:321727
47597 chr1 159111473 159111485 tfbsConsSites V$CEBP_01 score:963, zScore:3.13, srow:321728
47597 chr1 159111474 159111484 tfbsConsSites V$SREBP1_02 score:812, zScore:1.68, srow:321729
47597 chr1 159111474 159111487 tfbsConsSites V$FAC1_01 score:840, zScore:1.78, srow:321730
47597 chr1 159111478 159111483 tfbsConsSites V$AML1_01 score:1000, zScore:1.78, srow:321731
47597 chr1 159111516 159111537 tfbsConsSites V$TCF11MAFG_01 score:759, zScore:1.99, srow:321732
47597 chr1 159111373 159111628 phastConsElements100way lod=1753 score:733, srow:569459
  • 21 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
47597 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 3
47597 cellexp id=ENSG00000163568, name=AIM2, PrEC=1, str=9, LNCaP=0, str=0, DU145=4, str=6
47597 tcgameth site:cg12798524, B=0.95, L=0.88, H=0.7
47597 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305