DMR 48420 chr4:60377501-60377700 (200bp)

DMR Stats
Positionchr4:60377501-60377700 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesLPHN3 (1689273bp away)
ANODEV p-value0.00137229000048
FrequenciesBenign: 5.0 (71.43%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
48420 chr4 60377561 60377870 wgEncodeRegDnaseClusteredV2 9 score:247, srow:886942
48420 chr4 60377650 60377979 wgEncodeRegTfbsClusteredV3 EP300 score:145, expCount:1, expNums:401, expScores:145, srow:3049446
48420 chr4 60377673 60377936 wgEncodeRegTfbsClusteredV3 CEBPB score:285, expCount:1, expNums:378, expScores:285, srow:3049447
48420 chr4 60377675 60377918 wgEncodeRegTfbsClusteredV3 FOS score:173, expCount:1, expNums:556, expScores:173, srow:3049448
48420 chr4 60377677 60378016 wgEncodeRegTfbsClusteredV3 JUN score:121, expCount:1, expNums:381, expScores:121, srow:3049449
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
48420 cellmeth_recounts PrEC: 3, LNCaP: 3, DU145: 4
48420 tcgaexp gene=UGT2B10, entrez=7365, pos=chr4:393964-69886113(+), B=12, L=1, M=2, H=8
48420 tcgaexp gene=UGT2A3, entrez=79799, pos=chr4:506428-69817509(-), B=1, L=0, M=1, H=1
48420 tcgaexp gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458
48420 tcgaexp gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0