DMR 51965 chr19:41460551-41460700 (150bp)

DMR Stats
Positionchr19:41460551-41460700 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesCYP2A7 (0bp away)
ANODEV p-value0.00622506778355
FrequenciesBenign: 6.0 (85.71%), Low: 4.0 (66.67%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
51965 CYP2A7 15174 uc002opo.3 chr19 41381344 41534168 - 150 100.0 0.62 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
51965 chr19 41460521 41460875 wgEncodeRegDnaseClusteredV2 6 score:258, srow:580549
51965 chr19 41460263 41461146 wgEncodeRegTfbsClusteredV3 KAP1 score:430, expCount:1, expNums:508, expScores:430, srow:2025610
51965 chr19 41460357 41461066 wgEncodeRegTfbsClusteredV3 SETDB1 score:458, expCount:2, expNums:533,589, expScores:237,458, srow:2025611
51965 chr19 41460468 41460883 wgEncodeRegTfbsClusteredV3 TRIM28 score:233, expCount:1, expNums:242, expScores:233, srow:2025612
51965 chr19 41460482 41460865 wgEncodeRegTfbsClusteredV3 USF1 score:204, expCount:2, expNums:67,69, expScores:158,204, srow:2025613
51965 chr19 41460506 41460836 wgEncodeRegTfbsClusteredV3 ZNF143 score:543, expCount:2, expNums:361,552, expScores:543,161, srow:2025614
51965 chr19 41460544 41460839 wgEncodeRegTfbsClusteredV3 GATA3 score:336, expCount:1, expNums:272, expScores:336, srow:2025615
51965 chr19 41460553 41460856 wgEncodeRegTfbsClusteredV3 GATA2 score:138, expCount:1, expNums:498, expScores:138, srow:2025616
51965 chr19 41460657 41460775 wgEncodeRegTfbsClusteredV3 CBX3 score:772, expCount:1, expNums:211, expScores:772, srow:2025617
  • 9 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
51965 cellmeth_recounts PrEC: 4, LNCaP: 0, DU145: 3
51965 tcgaexp gene=CYP2A7, entrez=1549, pos=chr19:41381344-41534168(-), B=3, L=1, M=2, H=1