DMR 52457 chrY:10033801-10034000 (200bp)

DMR Stats
PositionchrY:10033801-10034000 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesJA668106 (661bp away)
ANODEV p-value0.0209989880248
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52457 chrY 10033666 10034215 wgEncodeRegDnaseClusteredV2 6 score:1000, srow:1281222
52457 chrY 10032934 10034686 cpgIsland CpG: 148 length:1753, cpgNum:148, gcNum:1208, perCpg:16.9, perGc:68.9, obsExp:0.72, srow:28634
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52457 cellmeth_recounts PrEC: 114, LNCaP: 15, DU145: 31
52457 cellmeth_diffreps_PrECvsLNCaP A=665, B=74, Length=2040, Event=Down, log2FC=-3.17, padj=0
52457 cellmeth_diffreps_PrECvsDU145 A=661, B=72, Length=1920, Event=Down, log2FC=-3.2, padj=0
52457 cellexp id=ENSG00000251966, name=AC010970.1, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0