DMR 52458 chrY:10034551-10034700 (150bp)

DMR Stats
PositionchrY:10034551-10034700 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesJA668106 (1411bp away)
ANODEV p-value0.00896460915697
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52458 chrY 10032934 10034686 cpgIsland CpG: 148 length:1753, cpgNum:148, gcNum:1208, perCpg:16.9, perGc:68.9, obsExp:0.72, srow:28634
52458 chrY 10034687 10036737 cpgShore — values(x.gr)[overs$srow, ]:51805
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52458 cellmeth_recounts PrEC: 77, LNCaP: 1, DU145: 1
52458 cellmeth_diffreps_PrECvsLNCaP A=665, B=74, Length=2040, Event=Down, log2FC=-3.17, padj=0
52458 cellmeth_diffreps_PrECvsDU145 A=661, B=72, Length=1920, Event=Down, log2FC=-3.2, padj=0