DMR 52466 chrY:13477751-13477950 (200bp)

DMR Stats
PositionchrY:13477751-13477950 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesDQ590126 (143132bp away)
ANODEV p-value0.00418982317692
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52466 chrY 13477526 13477775 wgEncodeRegDnaseClusteredV2 17 score:596, srow:1281327
52466 chrY 13477253 13478448 cpgIsland CpG: 85 length:1196, cpgNum:85, gcNum:803, perCpg:14.2, perGc:67.1, obsExp:0.63, srow:28642
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52466 cellmeth_recounts PrEC: 93, LNCaP: 4, DU145: 44
52466 cellmeth_diffreps_PrECvsLNCaP A=2154, B=69, Length=3020, Event=Down, log2FC=-4.96, padj=0
52466 cellmeth_diffreps_PrECvsDU145 A=1189, B=246, Length=1620, Event=Down, log2FC=-2.27, padj=0
52466 cellmeth_diffreps_LNCaPvsDU145 A=45.97, B=305.88, Length=1680, Event=Up, log2FC=2.73, padj=0
52466 cellexp id=ENSG00000259029, name=DUX4L18, PrEC=0, str=0, LNCaP=1, str=0, DU145=0, str=0