DMR 52469 chrY:13488451-13488650 (200bp)

DMR Stats
PositionchrY:13488451-13488650 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesIGL@ (140986bp away)
ANODEV p-value0.0121369297303
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52469 chrY 13487926 13489570 wgEncodeRegDnaseClusteredV2 62 score:1000, srow:1281331
52469 chrY 13488005 13489328 cpgIsland CpG: 104 length:1324, cpgNum:104, gcNum:910, perCpg:15.7, perGc:68.7, obsExp:0.67, srow:28643
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52469 cellmeth_recounts PrEC: 152, LNCaP: 0, DU145: 68
52469 cellmeth_diffreps_PrECvsLNCaP A=2523, B=81, Length=2520, Event=Down, log2FC=-4.96, padj=0
52469 cellmeth_diffreps_PrECvsDU145 A=2511, B=505, Length=2280, Event=Down, log2FC=-2.31, padj=0
52469 cellmeth_diffreps_LNCaPvsDU145 A=85.52, B=473.32, Length=2440, Event=Up, log2FC=2.47, padj=0
52469 cellexp id=ENSG00000258991, name=DUX4L19, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0