DMR 52471 chrY:13490901-13491150 (250bp)

DMR Stats
PositionchrY:13490901-13491150 (View on UCSC)
Width250bp
Genomic Contextintergenic
Nearest GenesIGL@ (138486bp away)
ANODEV p-value0.00564841307175
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52471 chrY 13491062 13491066 phastConsElements100way lod=14 score:255, srow:10102833
52471 chrY 13489329 13491328 cpgShore — values(x.gr)[overs$srow, ]:51821
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52471 cellmeth_recounts PrEC: 34, LNCaP: 0, DU145: 3
52471 cellmeth_diffreps_PrECvsLNCaP A=51, B=0, Length=440, Event=Down, log2FC=-Inf, padj=0
52471 cellmeth_diffreps_PrECvsDU145 A=51, B=2, Length=440, Event=Down, log2FC=-4.67, padj=8.2030865082799e-12