DMR 52498 chrY:23566751-23566900 (150bp)

DMR Stats
PositionchrY:23566751-23566900 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesRBMY2EP (3302bp away)
ANODEV p-value0.0132605879663
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52498 chrY 23566572 23566864 cpgIsland CpG: 25 length:293, cpgNum:25, gcNum:191, perCpg:17.1, perGc:65.2, obsExp:0.8, srow:28674
52498 chrY 23566865 23568864 cpgShore — values(x.gr)[overs$srow, ]:51880
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52498 cellmeth_recounts PrEC: 24, LNCaP: 14, DU145: 4
52498 cellmeth_diffreps_PrECvsLNCaP A=53, B=13, Length=360, Event=Down, log2FC=-2.03, padj=1.84191161192761e-05
52498 cellmeth_diffreps_PrECvsDU145 A=57, B=4, Length=460, Event=Down, log2FC=-3.83, padj=1.63493982309218e-11