DMR 52501 chrY:28773451-28773600 (150bp)

DMR Stats
PositionchrY:28773451-28773600 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesU6 (266211bp away)
ANODEV p-value0.0109148225485
FrequenciesBenign: 6.0 (85.71%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52501 chrY 28773316 28773544 cpgIsland CpG: 25 length:229, cpgNum:25, gcNum:172, perCpg:21.8, perGc:75.1, obsExp:0.78, srow:28689
52501 chrY 28773545 28775544 cpgShore — values(x.gr)[overs$srow, ]:51910
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
52501 cellmeth_recounts PrEC: 3, LNCaP: 0, DU145: 4
52501 cellexp id=ENSG00000237917, name=PARP4P1, PrEC=2, str=7, LNCaP=1, str=2, DU145=1, str=2