DMR 52504 chrY:28816101-28816350 (250bp)

DMR Stats
PositionchrY:28816101-28816350 (View on UCSC)
Width250bp
Genomic Contextintergenic
Nearest GenesU6 (308861bp away)
ANODEV p-value0.00309464603443
FrequenciesBenign: 7.0 (100.0%), Low: 5.0 (83.33%), High: 4.0 (44.44 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
52504 chrY 28816141 28816295 wgEncodeRegDnaseClusteredV2 5 score:210, srow:1281932
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
52504 cellmeth_recounts PrEC: 1, LNCaP: 5, DU145: 154
52504 cellmeth_diffreps_PrECvsDU145 A=145, B=1337, Length=3000, Event=Up, log2FC=3.2, padj=0
52504 cellmeth_diffreps_LNCaPvsDU145 A=78.04, B=1250.65, Length=3000, Event=Up, log2FC=4, padj=0