DMR 548 chr1:190153701-190153850 (150bp)

DMR Stats
Positionchr1:190153701-190153850 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesFAM5C (0bp away)
ANODEV p-value0.00289863868369
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
548 FAM5C 2305 uc001gse.1 chr1 190066797 190446759 - 150 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0) 0.0
548 FAM5C 2305 uc010pot.1 chr1 190066797 190444942 - 150 100.0 0.6 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
548 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 0
548 cellexp id=ENSG00000162670, name=BRINP3, PrEC=2, str=0, LNCaP=16, str=56, DU145=0, str=0
548 tcgaexp gene=FAM5C, entrez=339479, pos=chr1:190066797-190446759(-), B=464, L=718, M=666, H=474