DMR 5791 chr11:406801-407050 (250bp)

DMR Stats
Positionchr11:406801-407050 (View on UCSC)
Width250bp
Genomic Context3' end
Nearest GenesSIGIRR (0bp away)
ANODEV p-value0.000862179967854
FrequenciesBenign: 1.0 (14.29%), Low: 4.0 (66.67%), High: 2.0 (22.22 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
5791 SIGIRR 4081 uc001lpd.2 chr11 405716 414999 - 250 100.0 0.03 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (23.2), E8 (60.4), I8 (16.8), E9 (0), I9 (0), E10 (0) 0.0
5791 SIGIRR 4081 uc001lpe.1 chr11 405716 417397 - 250 100.0 0.03 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (23.2), E8 (60.4), I8 (16.8), E9 (0), I9 (0), E10 (0) 0.0
5791 SIGIRR 4081 uc001lpf.2 chr11 405716 417397 - 250 100.0 0.04 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (23.2), E8 (60.4), I8 (16.8), E9 (0), I9 (0), E10 (0) 0.0
5791 SIGIRR 4081 uc001lpg.3 chr11 405872 410027 - 250 100.0 0.03 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (23.2), E7 (60.4), I7 (16.8), E8 (0) 28.4
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
5791 chr11 406766 406815 wgEncodeRegDnaseClusteredV2 2 score:954, srow:184814
5791 chr11 406821 407570 wgEncodeRegDnaseClusteredV2 122 score:1000, srow:184815
5791 chr11 406590 407324 wgEncodeRegTfbsClusteredV3 POLR2A score:935, expCount:16, expNums:61,62,105,229,249,328,336,338,362,366,402,403,522,523,525,596, expScores:935,753,558,453,189,240,175,249,106,139,401,374,228,207,209,220, srow:639419
5791 chr11 406635 407358 wgEncodeRegTfbsClusteredV3 RBBP5 score:231, expCount:1, expNums:33, expScores:231, srow:639420
5791 chr11 406668 407103 wgEncodeRegTfbsClusteredV3 CTCF score:767, expCount:41, expNums:0,2,5,24,49,137,213,290,493,595,597,601,603,604,605,606,607,609,612,621,630,635,636,638,639,642,648,650,651,652,654,655,656,661,671,676,678,679,685,686,687, expScores:317,154,115,188,175,216,442,390,308,496,294,202,332,767,413,318,371,122,327,419,156,427,105,153,168,147,193,204,286,200,209,201,170,137,109,128,127,174,211,225,147, srow:639421
5791 chr11 406675 407339 wgEncodeRegTfbsClusteredV3 CCNT2 score:147, expCount:1, expNums:476, expScores:109, srow:639422
5791 chr11 406713 407152 wgEncodeRegTfbsClusteredV3 CBX3 score:450, expCount:1, expNums:211, expScores:450, srow:639423
5791 chr11 406719 407063 wgEncodeRegTfbsClusteredV3 YY1 score:187, expCount:2, expNums:244,245, expScores:155,187, srow:639424
5791 chr11 406722 407121 wgEncodeRegTfbsClusteredV3 NR2F2 score:255, expCount:1, expNums:225, expScores:255, srow:639425
5791 chr11 406730 407202 wgEncodeRegTfbsClusteredV3 ZBTB7A score:697, expCount:1, expNums:247, expScores:697, srow:639426
5791 chr11 406746 407246 wgEncodeRegTfbsClusteredV3 MAX score:826, expCount:2, expNums:223,511, expScores:826,225, srow:639427
5791 chr11 406757 407047 wgEncodeRegTfbsClusteredV3 SMC3 score:206, expCount:2, expNums:408,535, expScores:206,107, srow:639428
5791 chr11 406765 407070 wgEncodeRegTfbsClusteredV3 RAD21 score:425, expCount:6, expNums:108,149,231,264,310,355, expScores:212,425,258,245,118,133, srow:639429
5791 chr11 406778 407216 wgEncodeRegTfbsClusteredV3 MYC score:241, expCount:2, expNums:487,488, expScores:241,147, srow:639430
5791 chr11 406791 407054 wgEncodeRegTfbsClusteredV3 PAX5 score:262, expCount:1, expNums:100, expScores:262, srow:639431
5791 chr11 406797 407117 wgEncodeRegTfbsClusteredV3 E2F6 score:859, expCount:2, expNums:215,495, expScores:859,444, srow:639432
5791 chr11 406808 407303 wgEncodeRegTfbsClusteredV3 HMGN3 score:254, expCount:1, expNums:501, expScores:254, srow:639433
5791 chr11 406821 407192 wgEncodeRegTfbsClusteredV3 PHF8 score:439, expCount:1, expNums:30, expScores:439, srow:639434
5791 chr11 406861 407120 wgEncodeRegTfbsClusteredV3 TCF12 score:179, expCount:1, expNums:116, expScores:179, srow:639435
5791 chr11 406865 407244 wgEncodeRegTfbsClusteredV3 ELK1 score:185, expCount:1, expNums:496, expScores:185, srow:639436
5791 chr11 406870 407209 wgEncodeRegTfbsClusteredV3 CHD2 score:151, expCount:1, expNums:479, expScores:151, srow:639437
5791 chr11 406891 407210 wgEncodeRegTfbsClusteredV3 SP1 score:186, expCount:1, expNums:112, expScores:186, srow:639438
5791 chr11 406905 407274 wgEncodeRegTfbsClusteredV3 MAZ score:281, expCount:1, expNums:512, expScores:281, srow:639439
5791 chr11 406908 407211 wgEncodeRegTfbsClusteredV3 FOXP2 score:164, expCount:1, expNums:251, expScores:164, srow:639440
5791 chr11 406931 407226 wgEncodeRegTfbsClusteredV3 GABPA score:838, expCount:2, expNums:91,220, expScores:287,838, srow:639441
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  • 25 of 47 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
5791 cellmeth_recounts PrEC: 23, LNCaP: 129, DU145: 15
5791 cellmeth_diffreps_PrECvsLNCaP A=101, B=202, Length=420, Event=Up, log2FC=1, padj=3.16763251163113e-07
5791 cellmeth_diffreps_PrECvsDU145 A=251, B=23, Length=700, Event=Down, log2FC=-3.45, padj=0
5791 cellmeth_diffreps_LNCaPvsDU145 A=558.04, B=31.8, Length=1380, Event=Down, log2FC=-4.13, padj=0
5791 cellexp id=ENSG00000185187, name=SIGIRR, PrEC=804, str=295, LNCaP=3298, str=1795, DU145=329, str=114
5791 tcgameth site:cg18351999, B=0.51, L=0.51, H=0.45
5791 tcgameth site:cg24440302, B=0.3, L=0.42, H=0.3
5791 tcgaexp gene=SIGIRR, entrez=59307, pos=chr11:405716-417397(-), B=2062, L=2547, M=2519, H=2148