DMR 601 chr1:217896801-217896950 (150bp)

DMR Stats
Positionchr1:217896801-217896950 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesSPATA17 (0bp away)
ANODEV p-value0.0427986661537
FrequenciesBenign: 1.0 (14.29%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
601 SPATA17 2554 uc001hlh.1 chr1 217804695 218040484 + 150 100.0 0.35 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
601 SPATA17 2554 uc009xdr.1 chr1 217804695 217955664 + 150 100.0 0.47 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
601 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 1
601 cellexp id=ENSG00000162814, name=SPATA17, PrEC=63, str=57, LNCaP=118, str=91, DU145=30, str=25
601 tcgaexp gene=SPATA17, entrez=128153, pos=chr1:217804695-218040484(+), B=70, L=81, M=95, H=100