DMR 6375 chr12:52510451-52510600 (150bp)

DMR Stats
Positionchr12:52510451-52510600 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest Genesbpl 41-16 (8416bp away)
ANODEV p-value0.00531300383759
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
6375 chr12 52510421 52510610 wgEncodeRegDnaseClusteredV2 48 score:581, srow:271340
6375 chr12 52509962 52510617 wgEncodeRegTfbsClusteredV3 E2F1 score:383, expCount:1, expNums:572, expScores:383, srow:934279
6375 chr12 52510230 52510805 wgEncodeRegTfbsClusteredV3 BCL3 score:325, expCount:1, expNums:46, expScores:325, srow:934285
6375 chr12 52510314 52510748 wgEncodeRegTfbsClusteredV3 CTCF score:852, expCount:42, expNums:2,5,9,14,39,137,267,290,595,598,601,603,604,605,606,607,609,627,628,629,630,631,635,638,647,648,650,651,652,653,654,655,656,662,663,664,669,671,680,683,685,686, expScores:223,116,266,91,281,373,139,539,432,155,429,479,554,664,320,516,138,490,852,592,336,531,322,151,143,236,357,350,462,530,201,141,201,231,269,400,114,443,265,214,313,273, srow:934286
6375 chr12 52510333 52510652 wgEncodeRegTfbsClusteredV3 JUND score:202, expCount:2, expNums:142,350, expScores:168,202, srow:934287
6375 chr12 52510335 52510746 wgEncodeRegTfbsClusteredV3 RELA score:659, expCount:8, expNums:282,300,325,329,331,335,337,339, expScores:236,411,659,208,377,292,357,430, srow:934288
6375 chr12 52510346 52510655 wgEncodeRegTfbsClusteredV3 E2F4 score:238, expCount:1, expNums:562, expScores:238, srow:934289
6375 chr12 52510372 52510664 wgEncodeRegTfbsClusteredV3 FOS score:251, expCount:4, expNums:556,557,558,559, expScores:251,214,180,228, srow:934290
6375 chr12 52510401 52510636 wgEncodeRegTfbsClusteredV3 BATF score:241, expCount:1, expNums:81, expScores:241, srow:934291
6375 chr12 52510429 52510692 wgEncodeRegTfbsClusteredV3 RAD21 score:242, expCount:5, expNums:108,149,310,355,405, expScores:242,233,237,222,237, srow:934292
6375 chr12 52510434 52510703 wgEncodeRegTfbsClusteredV3 SMC3 score:151, expCount:1, expNums:313, expScores:151, srow:934293
  • 11 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
6375 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 0
6375 tcgaexp gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512
6375 tcgaexp gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045