DMR Stats | |
---|---|
Position | chr1:246770401-246770550 (View on UCSC) |
Width | 150bp |
Genomic Context | intron |
Nearest Genes | CNST (0bp away) |
ANODEV p-value | 0.0215849749637 |
Frequencies | Benign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
689 | CNST | 2803 | uc001ibo.4 | chr1 | 246729639 | 246811544 | + | 150 | 100.0 | 0.24 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
689 | CNST | 2803 | uc001ibp.3 | chr1 | 246729639 | 246831884 | + | 150 | 100.0 | 0.18 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) | 0.0 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
689 | cellmeth_recounts | PrEC: 9, LNCaP: 0, DU145: 3 | |
689 | cellmeth_diffreps_PrECvsLNCaP | A=35, B=0, Length=680, Event=Down, log2FC=-Inf, padj=2.94033921621231e-10 | |
689 | cellexp | id=ENSG00000162852, name=CNST, PrEC=1247, str=1541, LNCaP=2771, str=2643, DU145=1998, str=1854 | |
689 | cellexp | id=ENSG00000225300, name=RP11-439E19.1, PrEC=0, str=0, LNCaP=0, str=1, DU145=3, str=0 | |
689 | tcgaexp | gene=CNST, entrez=163882, pos=chr1:246729639-246831884(+), B=1838, L=1764, M=1825, H=2136 |