DMR 690 chr1:246795501-246795650 (150bp)

DMR Stats
Positionchr1:246795501-246795650 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesCNST (0bp away)
ANODEV p-value0.0333969371853
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
690 CNST 2803 uc001ibo.4 chr1 246729639 246811544 + 150 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
690 CNST 2803 uc001ibp.3 chr1 246729639 246831884 + 150 100.0 0.31 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
690 chr1 246795508 246795537 phastConsElements100way lod=69 score:413, srow:860403
690 chr1 246795550 246795785 phastConsElements100way lod=838 score:660, srow:860404
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
690 cellmeth_recounts PrEC: 17, LNCaP: 0, DU145: 6
690 cellmeth_diffreps_PrECvsLNCaP A=26, B=0, Length=380, Event=Down, log2FC=-Inf, padj=1.35542249872291e-07
690 cellmeth_diffreps_PrECvsDU145 A=26, B=5, Length=300, Event=Down, log2FC=-2.38, padj=0.00290451814714991
690 cellexp id=ENSG00000162852, name=CNST, PrEC=1247, str=1541, LNCaP=2771, str=2643, DU145=1998, str=1854
690 cellexp id=ENSG00000228955, name=RP11-452J6.2, PrEC=0, str=0, LNCaP=1, str=9, DU145=3, str=3
690 tcgameth site:cg04885562, B=0.94, L=0.92, H=0.92
690 tcgaexp gene=CNST, entrez=163882, pos=chr1:246729639-246831884(+), B=1838, L=1764, M=1825, H=2136