DMR 77 chr1:6627551-6627700 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:6627551-6627700 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | TAS1R1 (0bp away) |
| ANODEV p-value | 3.99844978526e-05 |
| Frequencies | Benign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 0.0 (0.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77 | TAS1R1 | 156 | uc001ant.3 | chr1 | 6615338 | 6639817 | + | 150 | 100.0 | 0.52 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 77 | TAS1R1 | 156 | uc001anu.3 | chr1 | 6615338 | 6639817 | + | 150 | 100.0 | 0.14 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 77 | chr1 | 6627626 | 6627890 | wgEncodeRegDnaseClusteredV2 | 2 | score:200, srow:5187 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 77 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 13 |  |
| 77 | cellexp | id=ENSG00000173662, name=TAS1R1, PrEC=2, str=4, LNCaP=39, str=58, DU145=1, str=1 |  |
| 77 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 |  |
| 77 | tcgaexp | gene=TAS1R1, entrez=80835, pos=chr1:6615338-6639817(+), B=7, L=10, M=11, H=11 |  |
| 77 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |