DMR 802 chr2:10222651-10222800 (150bp)

DMR Stats
Positionchr2:10222651-10222800 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesCYS1 (2112bp away)
ANODEV p-value0.0104324803487
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
802 chr2 10222661 10222830 wgEncodeRegDnaseClusteredV2 4 score:398, srow:598929
802 chr2 10222514 10223173 wgEncodeRegTfbsClusteredV3 MTA3 score:393, expCount:1, expNums:95, expScores:393, srow:2101989
802 chr2 10222533 10223361 wgEncodeRegTfbsClusteredV3 NFIC score:327, expCount:1, expNums:97, expScores:320, srow:2101990
802 chr2 10222572 10223290 wgEncodeRegTfbsClusteredV3 ATF2 score:381, expCount:1, expNums:79, expScores:319, srow:2101991
802 chr2 10222593 10223322 wgEncodeRegTfbsClusteredV3 FOXM1 score:376, expCount:1, expNums:90, expScores:219, srow:2101992
802 chr2 10222637 10222827 wgEncodeRegTfbsClusteredV3 PAX5 score:738, expCount:3, expNums:100,101,129, expScores:738,528,233, srow:2101993
802 chr2 10222648 10223017 wgEncodeRegTfbsClusteredV3 EP300 score:213, expCount:1, expNums:304, expScores:213, srow:2101994
802 chr2 10222654 10223243 wgEncodeRegTfbsClusteredV3 IKZF1 score:435, expCount:1, expNums:294, expScores:435, srow:2101995
802 chr2 10222671 10223219 wgEncodeRegTfbsClusteredV3 RUNX3 score:824, expCount:1, expNums:109, expScores:654, srow:2101996
802 chr2 10222693 10222982 wgEncodeRegTfbsClusteredV3 MEF2A score:186, expCount:1, expNums:93, expScores:186, srow:2101997
802 chr2 10222703 10222962 wgEncodeRegTfbsClusteredV3 TCF12 score:128, expCount:1, expNums:116, expScores:128, srow:2101998
802 chr2 10221017 10223016 cpgShore — values(x.gr)[overs$srow, ]:26436
  • 12 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
802 cellmeth_recounts PrEC: 5, LNCaP: 1, DU145: 19
802 cellmeth_diffreps_LNCaPvsDU145 A=39.55, B=15.9, Length=300, Event=Down, log2FC=-1.31, padj=0.107414240325623
802 cellmeth_diffreps_LNCaPvsDU145 A=0, B=13.1, Length=200, Event=Up, log2FC=Inf, padj=0.00251303816158297