DMR 8078 chr17:9451-9600 (150bp)
| DMR Stats | |
|---|---|
| Position | chr17:9451-9600 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | DOC2B (0bp away) |
| ANODEV p-value | 0.0183421714044 |
| Frequencies | Benign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8078 | DOC2B | 11876 | uc010vpx.1 | chr17 | 6011 | 31420 | - | 150 | 100.0 | 0.34 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 8078 | chr17 | 9481 | 9755 | wgEncodeRegDnaseClusteredV2 | 3 | score:185, srow:470908 |
| 8078 | chr17 | 9469 | 9824 | wgEncodeRegTfbsClusteredV3 | BCL3 | score:196, expCount:1, expNums:83, expScores:196, srow:1606138 |
- 2 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 8078 | cellmeth_recounts | PrEC: 222, LNCaP: 34, DU145: 23 |  |
| 8078 | cellmeth_diffreps_PrECvsLNCaP | A=365, B=33, Length=540, Event=Down, log2FC=-3.47, padj=0 |  |
| 8078 | cellmeth_diffreps_PrECvsDU145 | A=4, B=39, Length=360, Event=Up, log2FC=3.29, padj=8.04360331424773e-07 |  |
| 8078 | cellmeth_diffreps_PrECvsDU145 | A=364, B=49, Length=480, Event=Down, log2FC=-2.89, padj=0 |  |
| 8078 | cellmeth_diffreps_LNCaPvsDU145 | A=4.28, B=26.19, Length=280, Event=Up, log2FC=2.61, padj=0.00332849792309305 |  |
| 8078 | tcgaexp | gene=DOC2B, entrez=8447, pos=chr17:6011-31420(-), B=46, L=31, M=32, H=29 |  |