DMR 81 chr1:7317501-7317650 (150bp)

DMR Stats
Positionchr1:7317501-7317650 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesCAMTA1 (0bp away)
ANODEV p-value0.0176241834923
FrequenciesBenign: 4.0 (57.14%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
81 CAMTA1 162 uc001aoi.3 chr1 6845384 7829766 + 150 100.0 0.11 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
81 chr1 7317321 7317595 wgEncodeRegDnaseClusteredV2 4 score:463, srow:5759
81 chr1 7317253 7317928 wgEncodeRegTfbsClusteredV3 KAP1 score:354, expCount:1, expNums:365, expScores:354, srow:16193
  • 2 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
81 cellmeth_recounts PrEC: 3, LNCaP: 0, DU145: 0
81 cellexp id=ENSG00000171735, name=CAMTA1, PrEC=1333, str=672, LNCaP=1796, str=1755, DU145=1524, str=1409
81 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
81 tcgaexp gene=CAMTA1, entrez=23261, pos=chr1:6845384-7829766(+), B=1373, L=1307, M=1203, H=1168
81 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305