DMR 8670 chr18:59482651-59482800 (150bp)
| DMR Stats | |
|---|---|
| Position | chr18:59482651-59482800 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | RNF152 (0bp away) |
| ANODEV p-value | 0.00744783882433 |
| Frequencies | Benign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 3.0 (33.33 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8670 | RNF152 | 14010 | uc002lih.1 | chr18 | 59482304 | 59560304 | - | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (100) | 100.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 8670 | chr18 | 59482689 | 59482702 | tfbsConsSites | V$FOXO3_01 | score:837, zScore:1.91, srow:2385373 |
| 8670 | chr18 | 59482746 | 59482755 | tfbsConsSites | V$HMX1_01 | score:867, zScore:2.62, srow:2385374 |
| 8670 | chr18 | 59482671 | 59482682 | phastConsElements100way | lod=32 | score:337, srow:4075680 |
| 8670 | chr18 | 59482687 | 59482693 | phastConsElements100way | lod=26 | score:316, srow:4075681 |
| 8670 | chr18 | 59482702 | 59482722 | phastConsElements100way | lod=64 | score:405, srow:4075682 |
| 8670 | chr18 | 59482730 | 59482734 | phastConsElements100way | lod=29 | score:327, srow:4075683 |
| 8670 | chr18 | 59482751 | 59482765 | phastConsElements100way | lod=34 | score:343, srow:4075684 |
| 8670 | chr18 | 59482768 | 59482777 | phastConsElements100way | lod=51 | score:383, srow:4075685 |
| 8670 | chr18 | 59482782 | 59482789 | phastConsElements100way | lod=49 | score:379, srow:4075686 |
| 8670 | chr18 | 59482798 | 59482800 | phastConsElements100way | lod=16 | score:268, srow:4075687 |
- 10 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 8670 | cellmeth_recounts | PrEC: 1, LNCaP: 0, DU145: 4 |  |
| 8670 | cellexp | id=ENSG00000176641, name=RNF152, PrEC=1565, str=7902, LNCaP=138, str=65, DU145=30, str=19 |  |
| 8670 | tcgameth | site:cg26613312, B=0.94, L=0.94, H=0.92 |  |
| 8670 | tcgaexp | gene=RNF152, entrez=220441, pos=chr18:59482304-59560304(-), B=156, L=82, M=99, H=84 |  |