DMR 9057 chr19:43979551-43979750 (200bp)

DMR Stats
Positionchr19:43979551-43979750 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesPHLDB3 (0bp away)
ANODEV p-value0.00565744636284
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
9057 PHLDB3 15246 uc002own.4 chr19 43979255 44008985 - 200 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (27.5), E16 (73) 100.0
9057 PHLDB3 15246 uc010eit.3 chr19 43979255 43999846 - 200 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (27.5), E10 (73) 100.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
9057 chr19 43979261 43979755 wgEncodeRegDnaseClusteredV2 119 score:1000, srow:582215
9057 chr19 43978991 43980073 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:40, expNums:32,61,62,78,105,146,163,168,206,207,228,229,259,328,330,334,336,338,340,362,366,402,461,465,520,521,522,523,524,525,526,563,564,583,596,610,613,619,622,637, expScores:222,748,531,349,552,410,577,300,193,268,322,1000,283,250,191,175,245,184,232,180,165,547,128,321,467,516,582,653,186,454,357,478,446,586,352,168,213,125,432,145, srow:2032256
9057 chr19 43979175 43979750 wgEncodeRegTfbsClusteredV3 BCL3 score:531, expCount:1, expNums:46, expScores:531, srow:2032257
9057 chr19 43979209 43979748 wgEncodeRegTfbsClusteredV3 GABPA score:214, expCount:1, expNums:54, expScores:214, srow:2032259
9057 chr19 43979245 43979854 wgEncodeRegTfbsClusteredV3 SP4 score:253, expCount:1, expNums:155, expScores:253, srow:2032260
9057 chr19 43979260 43979855 wgEncodeRegTfbsClusteredV3 MYC score:424, expCount:5, expNums:486,487,489,560,561, expScores:110,236,424,252,153, srow:2032261
9057 chr19 43979262 43979757 wgEncodeRegTfbsClusteredV3 HMGN3 score:188, expCount:1, expNums:501, expScores:188, srow:2032262
9057 chr19 43979284 43979739 wgEncodeRegTfbsClusteredV3 CCNT2 score:331, expCount:1, expNums:476, expScores:331, srow:2032263
9057 chr19 43979299 43979693 wgEncodeRegTfbsClusteredV3 CHD2 score:230, expCount:2, expNums:345,380, expScores:230,150, srow:2032264
9057 chr19 43979308 43979671 wgEncodeRegTfbsClusteredV3 ELF1 score:304, expCount:2, expNums:88,217, expScores:219,304, srow:2032265
9057 chr19 43979315 43979718 wgEncodeRegTfbsClusteredV3 ZBTB7A score:251, expCount:1, expNums:247, expScores:251, srow:2032266
9057 chr19 43979319 43979694 wgEncodeRegTfbsClusteredV3 TCF7L2 score:138, expCount:1, expNums:363, expScores:138, srow:2032267
9057 chr19 43979321 43979821 wgEncodeRegTfbsClusteredV3 REST score:235, expCount:4, expNums:189,226,257,274, expScores:160,235,172,179, srow:2032268
9057 chr19 43979323 43979572 wgEncodeRegTfbsClusteredV3 TEAD4 score:201, expCount:1, expNums:160, expScores:201, srow:2032269
9057 chr19 43979328 43979663 wgEncodeRegTfbsClusteredV3 E2F4 score:410, expCount:2, expNums:494,562, expScores:176,410, srow:2032270
9057 chr19 43979332 43979641 wgEncodeRegTfbsClusteredV3 BRCA1 score:164, expCount:1, expNums:342, expScores:164, srow:2032271
9057 chr19 43979337 43979772 wgEncodeRegTfbsClusteredV3 MAZ score:567, expCount:2, expNums:297,512, expScores:256,567, srow:2032272
9057 chr19 43979340 43979619 wgEncodeRegTfbsClusteredV3 ZBTB33 score:128, expCount:1, expNums:165, expScores:128, srow:2032273
9057 chr19 43979351 43979834 wgEncodeRegTfbsClusteredV3 TAF1 score:409, expCount:3, expNums:157,238,261, expScores:409,135,129, srow:2032274
9057 chr19 43979356 43979641 wgEncodeRegTfbsClusteredV3 STAT3 score:445, expCount:5, expNums:565,566,567,568,569, expScores:217,333,342,349,445, srow:2032275
9057 chr19 43979358 43979661 wgEncodeRegTfbsClusteredV3 FOXP2 score:149, expCount:1, expNums:251, expScores:149, srow:2032276
9057 chr19 43979359 43979888 wgEncodeRegTfbsClusteredV3 TFAP2A score:257, expCount:1, expNums:369, expScores:257, srow:2032277
9057 chr19 43979366 43979901 wgEncodeRegTfbsClusteredV3 YY1 score:600, expCount:8, expNums:70,119,133,162,164,244,245,266, expScores:266,411,227,302,212,344,600,261, srow:2032278
9057 chr19 43979366 43979793 wgEncodeRegTfbsClusteredV3 RELA score:226, expCount:2, expNums:325,329, expScores:226,177, srow:2032279
9057 chr19 43979370 43979945 wgEncodeRegTfbsClusteredV3 KDM5B score:500, expCount:1, expNums:31, expScores:500, srow:2032280
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  • 25 of 72 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
9057 cellmeth_recounts PrEC: 2, LNCaP: 5, DU145: 1
9057 cellexp id=ENSG00000176531, name=PHLDB3, PrEC=618, str=880, LNCaP=630, str=330, DU145=475, str=327
9057 tcgameth site:cg18851960, B=0.43, L=0.46, H=0.4
9057 tcgaexp gene=PHLDB3, entrez=653583, pos=chr19:43979255-44008985(-), B=1136, L=1856, M=1726, H=1530