DMR 9264 chr20:44803151-44803750 (600bp)

DMR Stats
Positionchr20:44803151-44803750 (View on UCSC)
Width600bp
Genomic Context3' end
Nearest GenesCDH22 (0bp away)
ANODEV p-value2.06868578724e-05
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
9264 CDH22 18404 uc010ghk.2 chr20 44802372 44937137 - 600 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (5.83), E12 (94.33) 36.83
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
9264 chr20 44803041 44803190 wgEncodeRegDnaseClusteredV2 3 score:195, srow:722830
9264 chr20 44803221 44803455 wgEncodeRegDnaseClusteredV2 101 score:1000, srow:722831
9264 chr20 44803506 44803855 wgEncodeRegDnaseClusteredV2 5 score:350, srow:722832
9264 chr20 44802323 44803498 wgEncodeRegTfbsClusteredV3 EZH2 score:287, expCount:3, expNums:19,38,43, expScores:145,198,287, srow:2521026
9264 chr20 44803084 44803603 wgEncodeRegTfbsClusteredV3 SIN3A score:278, expCount:1, expNums:357, expScores:278, srow:2521027
9264 chr20 44803141 44803514 wgEncodeRegTfbsClusteredV3 REST score:157, expCount:2, expNums:188,257, expScores:155,157, srow:2521028
9264 chr20 44803165 44803561 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:95, expNums:2,5,9,12,14,16,18,20,24,35,37,39,42,44,48,49,72,137,174,213,262,267,290,463,493,595,597,598,601,603,604,605,606,607,609,612,615,618,621,627,628,629,630,631,635,636,638,639,640,641,642,643,644,645,646,648,650,651,652,653,654,655,656,657,658,659,660,661,662,663,664,665,666,667,668,669,670,671,672,673,674,675,676,677,678,679,680,681,682,683,684,685,686,687,689, expScores:503,911,365,416,294,450,196,471,455,123,521,234,325,413,586,476,187,974,1000,1000,621,201,1000,588,933,1000,1000,1000,1000,1000,1000,1000,1000,1000,661,987,448,366,1000,925,1000,1000,1000,1000,1000,751,552,1000,455,499,965,697,686,1000,827,496,1000,1000,1000,1000,1000,659,786,528,650,1000,605,783,1000,354,684,851,876,1000,243,522,126,1000,658,984,639,445,952,1000,538,782,448,397,538,797,112,677,1000,1000,115, srow:2521029
9264 chr20 44803176 44803479 wgEncodeRegTfbsClusteredV3 FOXP2 score:137, expCount:1, expNums:251, expScores:137, srow:2521030
9264 chr20 44803183 44803558 wgEncodeRegTfbsClusteredV3 YY1 score:248, expCount:3, expNums:119,162,203, expScores:248,241,156, srow:2521031
9264 chr20 44803184 44803515 wgEncodeRegTfbsClusteredV3 ZNF143 score:396, expCount:4, expNums:322,361,419,552, expScores:356,396,155,243, srow:2521032
9264 chr20 44803200 44803523 wgEncodeRegTfbsClusteredV3 E2F6 score:126, expCount:1, expNums:215, expScores:126, srow:2521033
9264 chr20 44803212 44803512 wgEncodeRegTfbsClusteredV3 SMC3 score:724, expCount:4, expNums:313,408,450,535, expScores:680,724,244,259, srow:2521034
9264 chr20 44803219 44803498 wgEncodeRegTfbsClusteredV3 CREB1 score:123, expCount:1, expNums:47, expScores:123, srow:2521035
9264 chr20 44803223 44803494 wgEncodeRegTfbsClusteredV3 RAD21 score:1000, expCount:11, expNums:108,149,193,231,264,280,310,355,405,448,466, expScores:431,1000,1000,569,1000,240,346,632,271,439,377, srow:2521036
9264 chr20 44803349 44803499 wgEncodeRegTfbsClusteredV3 ZBTB7A score:200, expCount:1, expNums:247, expScores:200, srow:2521037
9264 chr20 44803563 44803834 wgEncodeRegTfbsClusteredV3 CTCF score:159, expCount:3, expNums:603,607,667, expScores:159,138,121, srow:2521038
9264 chr20 44803165 44803182 tfbsConsSites V$AP4_01 score:811, zScore:1.66, srow:3127878
9264 chr20 44803168 44803185 tfbsConsSites V$AHR_01 score:777, zScore:1.88, srow:3127879
9264 chr20 44803198 44803211 tfbsConsSites V$ELK1_02 score:888, zScore:2.08, srow:3127880
9264 chr20 44803203 44803210 tfbsConsSites V$STAT3_02 score:985, zScore:1.64, srow:3127881
9264 chr20 44803259 44803279 tfbsConsSites V$NRSF_01 score:758, zScore:2.5, srow:3127882
9264 chr20 44803293 44803313 tfbsConsSites V$PAX4_01 score:851, zScore:2.63, srow:3127883
9264 chr20 44803303 44803319 tfbsConsSites V$PPARG_03 score:815, zScore:2.46, srow:3127884
9264 chr20 44803303 44803326 tfbsConsSites V$BRACH_01 score:696, zScore:2.02, srow:3127885
9264 chr20 44803333 44803352 tfbsConsSites V$P53_01 score:684, zScore:1.87, srow:3127886
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  • 25 of 85 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
9264 cellmeth_recounts PrEC: 88, LNCaP: 321, DU145: 10
9264 cellmeth_diffreps_PrECvsLNCaP A=110, B=232, Length=580, Event=Up, log2FC=1.08, padj=2.14396607284609e-09
9264 cellmeth_diffreps_PrECvsDU145 A=137, B=9, Length=820, Event=Down, log2FC=-3.93, padj=0
9264 cellmeth_diffreps_LNCaPvsDU145 A=274.74, B=9.35, Length=860, Event=Down, log2FC=-4.88, padj=0
9264 cellexp id=ENSG00000149654, name=CDH22, PrEC=0, str=0, LNCaP=1, str=1, DU145=4, str=2
9264 tcgameth site:cg12347346, B=0.33, L=0.41, H=0.35
9264 tcgameth site:cg13390630, B=0.3, L=0.41, H=0.26
9264 tcgameth site:cg17412248, B=0.23, L=0.26, H=0.21
9264 tcgameth site:cg17964981, B=0.33, L=0.39, H=0.3
9264 tcgaexp gene=CDH22, entrez=64405, pos=chr20:44802372-44937137(-), B=213, L=132, M=107, H=98