DMR 949 chr2:54483551-54483800 (250bp)

DMR Stats
Positionchr2:54483551-54483800 (View on UCSC)
Width250bp
Genomic Contextpromoter
Nearest GenesACYP2 (0bp away)
ANODEV p-value0.00366063542031
FrequenciesBenign: 0.0 (0.0%), Low: 3.0 (50.0%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
949 ACYP2 16339 uc002rxq.4 chr2 54342410 54532435 + 250 100.0 1.38 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
949 chr2 54482863 54483624 wgEncodeRegTfbsClusteredV3 MYC score:226, expCount:3, expNums:487,488,489, expScores:226,119,210, srow:2178424
949 chr2 54482984 54483605 wgEncodeRegTfbsClusteredV3 POLR2A score:1000, expCount:9, expNums:32,228,229,520,521,522,523,525,622, expScores:216,285,1000,283,274,377,321,552,237, srow:2178425
949 chr2 54483150 54483579 wgEncodeRegTfbsClusteredV3 E2F6 score:252, expCount:1, expNums:495, expScores:252, srow:2178430
949 chr2 54483223 54483622 wgEncodeRegTfbsClusteredV3 TAF1 score:146, expCount:1, expNums:238, expScores:146, srow:2178432
949 chr2 54483230 54483685 wgEncodeRegTfbsClusteredV3 IRF1 score:168, expCount:2, expNums:505,506, expScores:168,160, srow:2178433
949 chr2 54483248 54483687 wgEncodeRegTfbsClusteredV3 CBX3 score:302, expCount:1, expNums:211, expScores:302, srow:2178434
949 chr2 54483255 54483586 wgEncodeRegTfbsClusteredV3 CHD2 score:1000, expCount:1, expNums:479, expScores:1000, srow:2178435
949 chr2 54483297 54483576 wgEncodeRegTfbsClusteredV3 MAFF score:469, expCount:1, expNums:509, expScores:469, srow:2178438
949 chr2 54483298 54483557 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:228, expCount:1, expNums:232, expScores:228, srow:2178439
949 chr2 54483307 54483557 wgEncodeRegTfbsClusteredV3 ZBTB33 score:1000, expCount:1, expNums:246, expScores:1000, srow:2178440
949 chr2 54483435 54485434 cpgShore — values(x.gr)[overs$srow, ]:26940
  • 11 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
949 cellmeth_recounts PrEC: 1, LNCaP: 3, DU145: 8
949 cellexp id=ENSG00000170634, name=ACYP2, PrEC=340, str=336, LNCaP=560, str=386, DU145=255, str=221
949 tcgameth site:cg04458920, B=0.92, L=0.91, H=0.89
949 tcgaexp gene=ACYP2, entrez=98, pos=chr2:54342410-54532435(+), B=527, L=557, M=563, H=510