DMR 25226 chr1:36786651-36787000 (350bp)

DMR Stats
Positionchr1:36786651-36787000 (View on UCSC)
Width350bp
Genomic Context3' end
Nearest GenesSH3D21 (0bp away)
ANODEV p-value0.00465716425097
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
25226 SH3D21 653 uc010oia.1 chr1 36771994 36787379 + 350 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (1.71), E16 (98.29) 100.0
25226 SH3D21 653 uc010oib.1 chr1 36772708 36787379 + 350 100.0 0.45 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (1.71), E13 (98.29) 100.0
25226 SH3D21 653 uc010oic.1 chr1 36772708 36790484 + 350 100.0 0.19 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (1.71), E9 (44), I9 (54.57), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25226 chr1 36786760 36787009 wgEncodeRegTfbsClusteredV3 TEAD4 score:883, expCount:2, expNums:160,240, expScores:381,883, srow:104404
25226 chr1 36786760 36787023 wgEncodeRegTfbsClusteredV3 NRF1 score:159, expCount:1, expNums:518, expScores:159, srow:104405
25226 chr1 36786764 36787109 wgEncodeRegTfbsClusteredV3 EP300 score:369, expCount:3, expNums:145,263,519, expScores:174,213,369, srow:104406
25226 chr1 36786773 36787036 wgEncodeRegTfbsClusteredV3 HDAC2 score:158, expCount:2, expNums:141,222, expScores:158,148, srow:104407
25226 chr1 36786773 36787494 wgEncodeRegTfbsClusteredV3 E2F6 score:1000, expCount:2, expNums:215,495, expScores:467,675, srow:104408
25226 chr1 36786779 36787058 wgEncodeRegTfbsClusteredV3 JUND score:264, expCount:1, expNums:507, expScores:264, srow:104409
25226 chr1 36786783 36787078 wgEncodeRegTfbsClusteredV3 RCOR1 score:504, expCount:1, expNums:492, expScores:504, srow:104410
25226 chr1 36786786 36787049 wgEncodeRegTfbsClusteredV3 USF1 score:134, expCount:1, expNums:243, expScores:134, srow:104411
25226 chr1 36786798 36786988 wgEncodeRegTfbsClusteredV3 ETS1 score:422, expCount:1, expNums:218, expScores:422, srow:104412
25226 chr1 36786804 36787079 wgEncodeRegTfbsClusteredV3 TAL1 score:144, expCount:1, expNums:542, expScores:144, srow:104413
25226 chr1 36786815 36787070 wgEncodeRegTfbsClusteredV3 NANOG score:134, expCount:1, expNums:143, expScores:134, srow:104414
25226 chr1 36786815 36787280 wgEncodeRegTfbsClusteredV3 MAZ score:557, expCount:1, expNums:512, expScores:266, srow:104415
25226 chr1 36786817 36787214 wgEncodeRegTfbsClusteredV3 YY1 score:849, expCount:7, expNums:133,162,164,244,245,551,579, expScores:191,608,176,496,849,242,163, srow:104416
25226 chr1 36786821 36786942 wgEncodeRegTfbsClusteredV3 ELF1 score:236, expCount:1, expNums:217, expScores:236, srow:104417
25226 chr1 36786834 36786989 wgEncodeRegTfbsClusteredV3 TCF12 score:413, expCount:1, expNums:159, expScores:413, srow:104418
25226 chr1 36786845 36786935 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:473, expCount:1, expNums:232, expScores:473, srow:104419
25226 chr1 36786845 36787083 wgEncodeRegTfbsClusteredV3 MEF2A score:1000, expCount:1, expNums:224, expScores:1000, srow:104420
25226 chr1 36786852 36787371 wgEncodeRegTfbsClusteredV3 SIN3A score:178, expCount:1, expNums:357, expScores:178, srow:104421
25226 chr1 36786870 36786976 wgEncodeRegTfbsClusteredV3 REST score:399, expCount:1, expNums:226, expScores:399, srow:104422
25226 chr1 36786872 36787274 wgEncodeRegTfbsClusteredV3 ZBTB7A score:636, expCount:1, expNums:247, expScores:636, srow:104423
25226 chr1 36786883 36787371 wgEncodeRegTfbsClusteredV3 UBTF score:144, expCount:2, expNums:548,549, expScores:135,144, srow:104424
25226 chr1 36786897 36787126 wgEncodeRegTfbsClusteredV3 RXRA score:116, expCount:1, expNums:150, expScores:116, srow:104425
25226 chr1 36786959 36787328 wgEncodeRegTfbsClusteredV3 BCLAF1 score:150, expCount:1, expNums:210, expScores:150, srow:104426
25226 chr1 36786981 36787068 wgEncodeRegTfbsClusteredV3 GABPA score:266, expCount:1, expNums:220, expScores:266, srow:104427
25226 chr1 36786853 36786862 tfbsConsSites V$SP1_01 score:976, zScore:2.37, srow:80883

Omics Overlaps

Dmrid Omic Set Data Plot
25226 cellmeth_recounts PrEC: 98, LNCaP: 142, DU145: 13
25226 cellmeth_diffreps_PrECvsLNCaP A=259, B=153, Length=340, Event=Down, log2FC=-0.76, padj=8.5206330086452e-06
25226 cellmeth_diffreps_PrECvsDU145 A=603, B=34, Length=1500, Event=Down, log2FC=-4.15, padj=0
25226 cellmeth_diffreps_LNCaPvsDU145 A=415.86, B=31.8, Length=1460, Event=Down, log2FC=-3.71, padj=0
25226 cellexp id=ENSG00000214193, name=SH3D21, PrEC=1236, str=4923, LNCaP=385, str=211, DU145=607, str=584
25226 tcgameth site:cg02993069, B=0.51, L=0.59, H=0.55
25226 tcgaexp gene=SH3D21, entrez=79729, pos=chr1:36771994-36790484(+), B=219, L=278, M=316, H=377
25226 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305