DMR 258 chr1:46932251-46932400 (150bp)

DMR Stats
Positionchr1:46932251-46932400 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesLOC729041 (20876bp away)
ANODEV p-value0.00755464699467
FrequenciesBenign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 1.0 (11.11 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
258 chr1 46932131 46932892 cpgIsland CpG: 72 length:762, cpgNum:72, gcNum:450, perCpg:18.9, perGc:59.1, obsExp:1.08, srow:1062

Omics Overlaps

Dmrid Omic Set Data Plot
258 cellmeth_recounts PrEC: 6, LNCaP: 406, DU145: 3
258 cellmeth_diffreps_PrECvsLNCaP A=61, B=1901, Length=1520, Event=Up, log2FC=4.96, padj=0
258 cellmeth_diffreps_LNCaPvsDU145 A=2032.25, B=6.55, Length=1520, Event=Down, log2FC=-8.28, padj=0
258 cellexp id=ENSG00000225667, name=LINC00505, PrEC=0, str=2, LNCaP=0, str=0, DU145=3, str=11
258 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305