DMR 25851 chr1:226032901-226033150 (250bp)
| DMR Stats | |
|---|---|
| Position | chr1:226032901-226033150 (View on UCSC) |
| Width | 250bp |
| Genomic Context | 3' end |
| Nearest Genes | EPHX1 (0bp away) |
| ANODEV p-value | 0.0203215727853 |
| Frequencies | Benign: 2.0 (28.57%), Low: 4.0 (66.67%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25851 | EPHX1 | 2626 | uc001hpk.3 | chr1 | 225997797 | 226033262 | + | 250 | 100.0 | 0.12 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (100) | 100.0 |
| 25851 | EPHX1 | 2626 | uc001hpl.3 | chr1 | 226013002 | 226033262 | + | 250 | 100.0 | 0.12 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (100) | 100.0 |
| 25851 | EPHX1 | 2626 | uc031psj.1 | chr1 | 225998114 | 226033262 | + | 250 | 100.0 | 0.16 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (100) | 100.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 25851 | chr1 | 226033034 | 226033039 | phastConsElements100way | lod=34 | score:343, srow:803906 |
| 25851 | chr1 | 226033044 | 226033048 | phastConsElements100way | lod=26 | score:316, srow:803907 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 25851 | cellmeth_recounts | PrEC: 12, LNCaP: 1, DU145: 5 |  |
| 25851 | cellmeth_diffreps_PrECvsLNCaP | A=18, B=1, Length=320, Event=Down, log2FC=-4.17, padj=0.00067685324419202 |  |
| 25851 | cellmeth_diffreps_PrECvsDU145 | A=18, B=1, Length=200, Event=Down, log2FC=-4.17, padj=0.000790397688779211 |  |
| 25851 | cellexp | id=ENSG00000143819, name=EPHX1, PrEC=1105, str=1994, LNCaP=9525, str=13347, DU145=5968, str=4315 |  |
| 25851 | cellexp | id=ENSG00000242861, name=RP11-285F7.2, PrEC=23, str=133, LNCaP=136, str=141, DU145=87, str=91 |  |
| 25851 | tcgaexp | gene=EPHX1, entrez=2052, pos=chr1:225997797-226033262(+), B=10275, L=9283, M=9552, H=9324 |  |