DMR 26174 chr2:45171251-45172300 (1050bp)

DMR Stats
Positionchr2:45171251-45172300 (View on UCSC)
Width1050bp
Genomic Context3' end
Nearest GenesSIX3 (0bp away)
ANODEV p-value2.00551284512e-06
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26174 SIX3 16293 uc002run.2 chr2 45169037 45173216 + 1050 100.0 0.09 0 0.0 E1 (0), I1 (43.43), E2 (56.57) 8.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26174 chr2 45171826 45171839 tfbsConsSites V$ATF_01 score:827, zScore:1.74, srow:2615675
26174 chr2 45171827 45171838 tfbsConsSites V$CREBP1_Q2 score:840, zScore:1.7, srow:2615676
26174 chr2 45171827 45171838 tfbsConsSites V$CREB_Q2 score:868, zScore:2.07, srow:2615677
26174 chr2 45171883 45171896 tfbsConsSites V$OCT1_06 score:929, zScore:3.05, srow:2615678
26174 chr2 45171946 45171958 tfbsConsSites V$MZF1_02 score:866, zScore:1.86, srow:2615679
26174 chr2 45172041 45172070 tfbsConsSites V$PAX4_04 score:733, zScore:1.82, srow:2615680
26174 chr2 45172059 45172070 tfbsConsSites V$PAX4_03 score:969, zScore:2.73, srow:2615681
26174 chr2 45172085 45172094 tfbsConsSites V$FOXO1_01 score:966, zScore:1.94, srow:2615682
26174 chr2 45172140 45172160 tfbsConsSites V$NRSF_01 score:722, zScore:1.91, srow:2615683
26174 chr2 45172151 45172159 tfbsConsSites V$ZIC1_01 score:957, zScore:2.46, srow:2615684
26174 chr2 45172151 45172159 tfbsConsSites V$ZIC2_01 score:906, zScore:2.03, srow:2615685
26174 chr2 45172151 45172159 tfbsConsSites V$ZIC3_01 score:933, zScore:2.04, srow:2615686
26174 chr2 45172151 45172161 tfbsConsSites V$SREBP1_02 score:815, zScore:1.73, srow:2615687
26174 chr2 45172211 45172225 tfbsConsSites V$TATA_01 score:874, zScore:1.85, srow:2615688
26174 chr2 45172276 45172290 tfbsConsSites V$TAXCREB_01 score:774, zScore:1.66, srow:2615689
26174 chr2 45172280 45172290 tfbsConsSites V$SREBP1_02 score:886, zScore:2.9, srow:2615690
26174 chr2 45172280 45172295 tfbsConsSites V$AHRARNT_01 score:841, zScore:1.89, srow:2615691
26174 chr2 45172283 45172297 tfbsConsSites V$E47_01 score:856, zScore:1.66, srow:2615692
26174 chr2 45172285 45172303 tfbsConsSites V$PAX2_01 score:803, zScore:2.42, srow:2615693
26174 chr2 45172287 45172299 tfbsConsSites V$TCF11_01 score:965, zScore:2.57, srow:2615694
26174 chr2 45171841 45171841 cosmic COSM300499 srow:645047
26174 chr2 45171878 45171878 cosmic COSM1306822 srow:645048
26174 chr2 45171689 45171691 phastConsElements100way lod=13 score:247, srow:4513291
26174 chr2 45171697 45171808 phastConsElements100way lod=942 score:671, srow:4513292
26174 chr2 45171810 45171920 phastConsElements100way lod=1083 score:685, srow:4513293

Omics Overlaps

Dmrid Omic Set Data Plot
26174 cellmeth_recounts PrEC: 63, LNCaP: 515, DU145: 78
26174 cellmeth_diffreps_PrECvsLNCaP A=63, B=375, Length=780, Event=Up, log2FC=2.57, padj=0
26174 cellmeth_diffreps_PrECvsDU145 A=42, B=11, Length=340, Event=Down, log2FC=-1.93, padj=0.000523743958488681
26174 cellmeth_diffreps_PrECvsDU145 A=2, B=24, Length=260, Event=Up, log2FC=3.58, padj=0.000159268381260165
26174 cellmeth_diffreps_LNCaPvsDU145 A=422.27, B=45.84, Length=920, Event=Down, log2FC=-3.2, padj=0
26174 cellexp id=ENSG00000138083, name=SIX3, PrEC=0, str=2, LNCaP=7, str=3, DU145=246, str=65
26174 tcgameth site:cg00097146, B=0.19, L=0.58, H=0.55
26174 tcgameth site:cg02120584, B=0.51, L=0.71, H=0.68
26174 tcgameth site:cg02649597, B=0.24, L=0.52, H=0.51
26174 tcgameth site:cg03717442, B=0.8, L=0.87, H=0.87
26174 tcgaexp gene=SIX3, entrez=6496, pos=chr2:45169037-45173216(+), B=0, L=0, M=1, H=2