DMR 26543 chr2:171572651-171573550 (900bp)

DMR Stats
Positionchr2:171572651-171573550 (View on UCSC)
Width900bp
Genomic Context3' end
Nearest GenesSP5 (0bp away)
ANODEV p-value7.96121680583e-06
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
26543 SP5 17256 uc002uge.3 chr2 171571857 171574498 + 900 100.0 0.41 0 0.0 E1 (0), I1 (13.11), E2 (86.89) 5.78
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
26543 chr2 171573474 171573737 wgEncodeRegTfbsClusteredV3 BHLHE40 score:1000, expCount:3, expNums:171,276,423, expScores:88,213,1000, srow:2326694
26543 chr2 171573478 171573753 wgEncodeRegTfbsClusteredV3 USF2 score:287, expCount:1, expNums:360, expScores:287, srow:2326695
26543 chr2 171573491 171573740 wgEncodeRegTfbsClusteredV3 TEAD4 score:230, expCount:1, expNums:160, expScores:230, srow:2326696
26543 chr2 171573500 171573763 wgEncodeRegTfbsClusteredV3 USF1 score:611, expCount:3, expNums:161,202,265, expScores:611,179,159, srow:2326697
26543 chr2 171573504 171573763 wgEncodeRegTfbsClusteredV3 TCF12 score:283, expCount:1, expNums:159, expScores:283, srow:2326698
26543 chr2 171573509 171573944 wgEncodeRegTfbsClusteredV3 TAF1 score:699, expCount:2, expNums:65,199, expScores:197,699, srow:2326699
26543 chr2 171572781 171572801 tfbsConsSites V$STAT1_01 score:771, zScore:1.92, srow:2851574
26543 chr2 171572782 171572801 tfbsConsSites V$P53_01 score:697, zScore:2.09, srow:2851575
26543 chr2 171572790 171572801 tfbsConsSites V$AREB6_03 score:906, zScore:2.17, srow:2851576
26543 chr2 171572798 171572816 tfbsConsSites V$AHRARNT_02 score:820, zScore:2.59, srow:2851577
26543 chr2 171572801 171572810 tfbsConsSites V$HMX1_01 score:810, zScore:1.68, srow:2851578
26543 chr2 171572873 171572886 tfbsConsSites V$ELK1_02 score:866, zScore:1.73, srow:2851579
26543 chr2 171572930 171572953 tfbsConsSites V$COMP1_01 score:798, zScore:1.96, srow:2851580
26543 chr2 171572936 171572954 tfbsConsSites V$SEF1_C score:732, zScore:1.91, srow:2851581
26543 chr2 171572939 171572959 tfbsConsSites V$PAX4_01 score:808, zScore:1.84, srow:2851582
26543 chr2 171572942 171572961 tfbsConsSites V$P53_01 score:760, zScore:3.18, srow:2851583
26543 chr2 171572954 171572964 tfbsConsSites V$CP2_01 score:895, zScore:2, srow:2851584
26543 chr2 171572973 171572984 tfbsConsSites V$EGR1_01 score:903, zScore:2.89, srow:2851585
26543 chr2 171572973 171572984 tfbsConsSites V$EGR2_01 score:866, zScore:2.29, srow:2851586
26543 chr2 171572973 171572984 tfbsConsSites V$EGR3_01 score:841, zScore:1.99, srow:2851587
26543 chr2 171572973 171572984 tfbsConsSites V$NGFIC_01 score:888, zScore:2.63, srow:2851588
26543 chr2 171572990 171573013 tfbsConsSites V$HTF_01 score:767, zScore:1.8, srow:2851589
26543 chr2 171572992 171573006 tfbsConsSites V$TAXCREB_01 score:904, zScore:3.93, srow:2851590
26543 chr2 171572995 171573008 tfbsConsSites V$ATF_01 score:833, zScore:1.85, srow:2851591
26543 chr2 171572996 171573006 tfbsConsSites V$AP1FJ_Q2 score:924, zScore:2.01, srow:2851592

Omics Overlaps

Dmrid Omic Set Data Plot
26543 cellmeth_recounts PrEC: 101, LNCaP: 3185, DU145: 26
26543 cellmeth_diffreps_PrECvsLNCaP A=402, B=4269, Length=2660, Event=Up, log2FC=3.41, padj=0
26543 cellmeth_diffreps_PrECvsDU145 A=395, B=41, Length=1480, Event=Down, log2FC=-3.27, padj=0
26543 cellmeth_diffreps_LNCaPvsDU145 A=4563.75, B=46.77, Length=2640, Event=Down, log2FC=-6.61, padj=0
26543 cellexp id=ENSG00000204335, name=SP5, PrEC=4, str=0, LNCaP=2, str=0, DU145=98, str=73
26543 tcgameth site:cg01042246, B=0.21, L=0.49, H=0.46
26543 tcgameth site:cg01571735, B=0.14, L=0.51, H=0.47
26543 tcgameth site:cg12045337, B=0.15, L=0.45, H=0.39
26543 tcgameth site:cg18798922, B=0.11, L=0.35, H=0.32
26543 tcgameth site:cg24772753, B=0.47, L=0.71, H=0.7
26543 tcgaexp gene=SP5, entrez=389058, pos=chr2:171571857-171574498(+), B=174, L=495, M=434, H=410