DMR 29893 chr8:49468251-49469100 (850bp)

DMR Stats
Positionchr8:49468251-49469100 (View on UCSC)
Width850bp
Genomic Contextintergenic
Nearest GenesEFCAB1 (154250bp away)
ANODEV p-value4.33801143155e-12
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
29893 chr8 49468575 49468596 tfbsConsSites V$MEF2_03 score:800, zScore:2.1, srow:5105213
29893 chr8 49468588 49468602 tfbsConsSites V$HNF3B_01 score:867, zScore:1.84, srow:5105214
29893 chr8 49468636 49468650 tfbsConsSites V$HNF1_01 score:816, zScore:1.98, srow:5105215
29893 chr8 49468656 49468669 tfbsConsSites V$POU3F2_01 score:791, zScore:1.74, srow:5105216
29893 chr8 49468676 49468683 tfbsConsSites V$STAT1_03 score:997, zScore:1.94, srow:5105217
29893 chr8 49468792 49468798 tfbsConsSites V$AP2REP_01 score:957, zScore:1.65, srow:5105218
29893 chr8 49468796 49468805 tfbsConsSites V$NFKAPPAB50_01 score:861, zScore:1.73, srow:5105219
29893 chr8 49468811 49468819 tfbsConsSites V$MSX1_01 score:898, zScore:1.75, srow:5105220
29893 chr8 49468845 49468861 tfbsConsSites V$YY1_01 score:867, zScore:1.82, srow:5105221
29893 chr8 49468846 49468863 tfbsConsSites V$SRF_01 score:771, zScore:2.53, srow:5105222
29893 chr8 49468847 49468862 tfbsConsSites V$FREAC3_01 score:809, zScore:1.85, srow:5105223
29893 chr8 49468851 49468859 tfbsConsSites V$MSX1_01 score:942, zScore:2.59, srow:5105224
29893 chr8 49468873 49468894 tfbsConsSites V$TCF11MAFG_01 score:747, zScore:1.76, srow:5105225
29893 chr8 49468952 49468970 tfbsConsSites V$AHRARNT_02 score:808, zScore:2.36, srow:5105226
29893 chr8 49469019 49469026 tfbsConsSites V$STAT4_01 score:1000, zScore:1.65, srow:5105227
29893 chr8 49469025 49469040 tfbsConsSites V$FREAC2_01 score:817, zScore:1.81, srow:5105228
29893 chr8 49469025 49469040 tfbsConsSites V$FREAC4_01 score:877, zScore:3.17, srow:5105229
29893 chr8 49469026 49469033 tfbsConsSites V$CREBP1_01 score:877, zScore:1.83, srow:5105230
29893 chr8 49469027 49469040 tfbsConsSites V$FOXO1_02 score:839, zScore:2.28, srow:5105231
29893 chr8 49469027 49469040 tfbsConsSites V$FOXO3_01 score:835, zScore:1.87, srow:5105232
29893 chr8 49469027 49469040 tfbsConsSites V$FOXO4_02 score:824, zScore:1.82, srow:5105233
29893 chr8 49469085 49469095 tfbsConsSites V$GATA_C score:906, zScore:2.09, srow:5105234
29893 chr8 49468236 49468252 phastConsElements100way lod=22 score:300, srow:8825221
29893 chr8 49468301 49468303 phastConsElements100way lod=15 score:262, srow:8825222
29893 chr8 49468316 49468322 phastConsElements100way lod=17 score:274, srow:8825223

Omics Overlaps

Dmrid Omic Set Data Plot
29893 cellmeth_recounts PrEC: 3, LNCaP: 396, DU145: 28
29893 cellmeth_diffreps_PrECvsLNCaP A=4, B=318, Length=1100, Event=Up, log2FC=6.31, padj=0
29893 cellmeth_diffreps_LNCaPvsDU145 A=35.28, B=0.94, Length=400, Event=Down, log2FC=-5.24, padj=4.08953502356965e-08
29893 cellmeth_diffreps_LNCaPvsDU145 A=304.68, B=18.71, Length=660, Event=Down, log2FC=-4.03, padj=0
29893 cellexp id=ENSG00000253608, name=RP11-770E5.1, PrEC=8, str=27, LNCaP=0, str=0, DU145=0, str=0
29893 cellexp id=ENSG00000253688, name=RP11-567J20.2, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0
29893 tcgameth site:cg04920358, B=0.07, L=0.47, H=0.4
29893 tcgameth site:cg10826197, B=0.03, L=0.33, H=0.38
29893 tcgameth site:cg14095438, B=0.16, L=0.56, H=0.51
29893 tcgameth site:cg14907769, B=0.18, L=0.62, H=0.57
29893 tcgameth site:cg18991611, B=0.07, L=0.59, H=0.54
29893 tcgameth site:cg19414967, B=0.33, L=0.67, H=0.66
29893 tcgameth site:cg20527270, B=0.1, L=0.67, H=0.56
29893 tcgameth site:cg27038634, B=0.27, L=0.55, H=0.55