DMR 31165 chr10:101279851-101280500 (650bp)
| DMR Stats | |
|---|---|
| Position | chr10:101279851-101280500 (View on UCSC) |
| Width | 650bp |
| Genomic Context | intergenic |
| Nearest Genes | DQ372722 (5606bp away) |
| ANODEV p-value | 1.23450986308e-08 |
| Frequencies | Benign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 31165 | chr10 | 101280109 | 101280123 | tfbsConsSites | V$ISRE_01 | score:821, zScore:2.4, srow:672835 |
| 31165 | chr10 | 101280136 | 101280147 | tfbsConsSites | V$PAX4_03 | score:906, zScore:1.67, srow:672836 |
| 31165 | chr10 | 101280208 | 101280215 | tfbsConsSites | V$E2F_02 | score:896, zScore:2.02, srow:672837 |
| 31165 | chr10 | 101280211 | 101280231 | tfbsConsSites | V$STAT1_01 | score:781, zScore:2.08, srow:672838 |
| 31165 | chr10 | 101280229 | 101280244 | tfbsConsSites | V$BRN2_01 | score:855, zScore:2.75, srow:672839 |
| 31165 | chr10 | 101280245 | 101280262 | tfbsConsSites | V$MIF1_01 | score:776, zScore:1.9, srow:672840 |
| 31165 | chr10 | 101280282 | 101280297 | tfbsConsSites | V$MEF2_01 | score:790, zScore:2.39, srow:672841 |
| 31165 | chr10 | 101279816 | 101279869 | phastConsElements100way | lod=99 | score:448, srow:1180693 |
| 31165 | chr10 | 101279877 | 101279897 | phastConsElements100way | lod=58 | score:395, srow:1180694 |
| 31165 | chr10 | 101279904 | 101279917 | phastConsElements100way | lod=36 | score:348, srow:1180695 |
| 31165 | chr10 | 101279922 | 101279927 | phastConsElements100way | lod=25 | score:312, srow:1180696 |
| 31165 | chr10 | 101279947 | 101279957 | phastConsElements100way | lod=62 | score:402, srow:1180697 |
| 31165 | chr10 | 101279963 | 101280061 | phastConsElements100way | lod=533 | score:615, srow:1180698 |
| 31165 | chr10 | 101280091 | 101280093 | phastConsElements100way | lod=13 | score:247, srow:1180699 |
| 31165 | chr10 | 101280102 | 101280124 | phastConsElements100way | lod=55 | score:390, srow:1180700 |
| 31165 | chr10 | 101280137 | 101280145 | phastConsElements100way | lod=13 | score:247, srow:1180701 |
| 31165 | chr10 | 101280162 | 101280173 | phastConsElements100way | lod=26 | score:316, srow:1180702 |
| 31165 | chr10 | 101280189 | 101280328 | phastConsElements100way | lod=823 | score:658, srow:1180703 |
| 31165 | chr10 | 101280338 | 101280350 | phastConsElements100way | lod=32 | score:337, srow:1180704 |
| 31165 | chr10 | 101279942 | 101280382 | cpgIsland | CpG: 38 | length:441, cpgNum:38, gcNum:272, perCpg:17.2, perGc:61.7, obsExp:0.91, srow:3126 |
| 31165 | chr10 | 101277942 | 101279941 | cpgShore | — | values(x.gr)[overs$srow, ]:5813 |
| 31165 | chr10 | 101280383 | 101281181 | cpgShore | — | values(x.gr)[overs$srow, ]:5814 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 31165 | cellmeth_recounts | PrEC: 1, LNCaP: 29, DU145: 41 |  |
| 31165 | cellmeth_diffreps_PrECvsLNCaP | A=0, B=12, Length=260, Event=Up, log2FC=Inf, padj=0.00157949948552458 |  |
| 31165 | cellmeth_diffreps_PrECvsDU145 | A=0, B=11, Length=240, Event=Up, log2FC=Inf, padj=0.00313959514768542 |  |
| 31165 | cellmeth_diffreps_PrECvsDU145 | A=1, B=21, Length=340, Event=Up, log2FC=4.39, padj=0.000134575124164672 |  |
| 31165 | tcgameth | site:cg23536629, B=0.17, L=0.52, H=0.47 |  |
| 31165 | tcgameth | site:cg24331598, B=0.08, L=0.43, H=0.4 |  |
| 31165 | tcgaexp | gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0 |  |