DMR 34110 chr17:27892901-27893600 (700bp)

DMR Stats
Positionchr17:27892901-27893600 (View on UCSC)
Width700bp
Genomic Contextpromoter
Nearest GenesABHD15 (0bp away)
ANODEV p-value0.000242374832034
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
34110 ABHD15 12501 uc002hed.2 chr17 27887689 27894042 - 700 100.0 0.86 0 8.29 E1 (71), I1 (29), E2 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34110 chr17 27893425 27894334 wgEncodeRegTfbsClusteredV3 E2F1 score:497, expCount:3, expNums:384,390,572, expScores:346,164,330, srow:1662318
34110 chr17 27893463 27893992 wgEncodeRegTfbsClusteredV3 TFAP2A score:285, expCount:1, expNums:369, expScores:285, srow:1662319
34110 chr17 27893480 27894264 wgEncodeRegTfbsClusteredV3 TFAP2C score:452, expCount:1, expNums:370, expScores:155, srow:1662320
34110 chr17 27893599 27894094 wgEncodeRegTfbsClusteredV3 CTCF score:311, expCount:11, expNums:595,597,604,605,606,607,628,630,631,651,655, expScores:168,120,311,117,148,175,278,148,197,206,111, srow:1662321
34110 chr17 27893154 27893163 tfbsConsSites V$P53_02 score:957, zScore:1.98, srow:2121634
34110 chr17 27893230 27893244 tfbsConsSites V$TAXCREB_02 score:765, zScore:2.03, srow:2121635
34110 chr17 27893282 27893296 tfbsConsSites V$E2F_01 score:816, zScore:2.85, srow:2121636
34110 chr17 27893298 27893309 tfbsConsSites V$AP2_Q6 score:908, zScore:2.17, srow:2121637
34110 chr17 27893311 27893318 tfbsConsSites V$STAT3_02 score:985, zScore:1.64, srow:2121638
34110 chr17 27893383 27893403 tfbsConsSites V$PAX4_01 score:820, zScore:2.06, srow:2121639
34110 chr17 27893387 27893406 tfbsConsSites V$YY1_02 score:775, zScore:1.88, srow:2121640
34110 chr17 27893393 27893413 tfbsConsSites V$NRSF_01 score:729, zScore:2.03, srow:2121641
34110 chr17 27893406 27893425 tfbsConsSites V$YY1_02 score:762, zScore:1.66, srow:2121642
34110 chr17 27893493 27893502 tfbsConsSites V$NFKAPPAB_01 score:902, zScore:1.72, srow:2121643
34110 chr17 27893557 27893576 tfbsConsSites V$PPARA_01 score:757, zScore:2.09, srow:2121644
34110 chr17 27893109 27893109 cosmic COSM352646 srow:489240
34110 chr17 27893424 27893424 cosmic COSM560453 srow:489241
34110 chr17 27893470 27893470 cosmic COSM312549 srow:489242
34110 chr17 27893483 27893483 cosmic COSM472506 srow:489243
34110 chr17 27893552 27893554 cosmic COSM1190910 srow:489244
34110 chr17 27893568 27893568 cosmic COSM1679678 srow:489245
34110 chr17 27893098 27893111 phastConsElements100way lod=127 score:473, srow:3631853
34110 chr17 27893119 27893132 phastConsElements100way lod=108 score:457, srow:3631854
34110 chr17 27893134 27893138 phastConsElements100way lod=14 score:255, srow:3631855
34110 chr17 27893143 27893159 phastConsElements100way lod=76 score:422, srow:3631856

Omics Overlaps

Dmrid Omic Set Data Plot
34110 cellmeth_recounts PrEC: 90, LNCaP: 1780, DU145: 0
34110 cellmeth_diffreps_PrECvsLNCaP A=134, B=1782, Length=1400, Event=Up, log2FC=3.73, padj=0
34110 cellmeth_diffreps_PrECvsDU145 A=133, B=0, Length=700, Event=Down, log2FC=-Inf, padj=0
34110 cellmeth_diffreps_LNCaPvsDU145 A=1905.04, B=0.94, Length=1380, Event=Down, log2FC=-10.99, padj=0
34110 cellexp id=ENSG00000167543, name=TP53I13, PrEC=1666, str=1928, LNCaP=2080, str=805, DU145=2005, str=1608
34110 cellexp id=ENSG00000168792, name=ABHD15, PrEC=672, str=1303, LNCaP=442, str=511, DU145=1346, str=1502
34110 cellexp id=ENSG00000264031, name=RP11-68I3.2, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
34110 tcgameth site:cg04528771, B=0.45, L=0.62, H=0.59
34110 tcgameth site:cg23112192, B=0.39, L=0.61, H=0.56
34110 tcgameth site:cg23473955, B=0.39, L=0.7, H=0.64
34110 tcgaexp gene=CRHR1, entrez=1394, pos=chr17:954315-43913194(+), B=36, L=21, M=25, H=18
34110 tcgaexp gene=MAPT, entrez=4137, pos=chr17:762281-44105699(+), B=1933, L=2382, M=2487, H=2583
34110 tcgaexp gene=NSF, entrez=4905, pos=chr17:266212-44834828(+), B=3355, L=5678, M=5410, H=5700
34110 tcgaexp gene=PLEKHM1, entrez=9842, pos=chr17:128328-43568146(-), B=1993, L=1631, M=1589, H=1418
34110 tcgaexp gene=LRRC37A, entrez=9884, pos=chr17:415627-44415160(+), B=924, L=896, M=971, H=940
34110 tcgaexp gene=ARL17A, entrez=51326, pos=chr17:195721-44657088(-), B=200, L=195, M=210, H=230
34110 tcgaexp gene=LRRC37A4P, entrez=55073, pos=chr17:197706-43597889(-), B=1015, L=1512, M=1396, H=1450
34110 tcgaexp gene=ABHD15, entrez=116236, pos=chr17:27887689-27894042(-), B=696, L=582, M=589, H=604
34110 tcgaexp gene=CRHR1-IT1, entrez=147081, pos=chr17:1143726-43723595(+), B=197, L=211, M=215, H=223
34110 tcgaexp gene=SPPL2C, entrez=162540, pos=chr17:943102-43924438(+), B=0, L=0, M=0, H=0
34110 tcgaexp gene=ARHGAP27, entrez=201176, pos=chr17:86404-43511112(-), B=1570, L=1264, M=1273, H=1486
34110 tcgaexp gene=STH, entrez=246744, pos=chr17:790689-44077060(+), B=0, L=0, M=0, H=0
34110 tcgaexp gene=KANSL1, entrez=284058, pos=chr17:563498-44302740(-), B=3141, L=2594, M=2797, H=3017
34110 tcgaexp gene=MGC57346, entrez=401884, pos=chr17:1151952-43715329(+), B=601, L=581, M=566, H=598
34110 tcgaexp gene=LRRC37A2, entrez=474170, pos=chr17:197706-44633014(+), B=351, L=310, M=361, H=377
34110 tcgaexp gene=LOC644172, entrez=644172, pos=chr17:1188439-43679748(-), B=84, L=82, M=93, H=90
34110 tcgaexp gene=MAPT-AS1, entrez=100128977, pos=chr17:894694-43972879(-), B=1, L=2, M=4, H=2
34110 tcgaexp gene=MAPT-IT1, entrez=100130148, pos=chr17:891434-43976164(+), B=5, L=3, M=3, H=4