DMR 34823 chr19:566351-567000 (650bp)

DMR Stats
Positionchr19:566351-567000 (View on UCSC)
Width650bp
Genomic Contextintergenic
Nearest GenesBSG (4276bp away)
ANODEV p-value0.0011006113741
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
34823 chr19 566494 566773 wgEncodeRegTfbsClusteredV3 JUND score:254, expCount:1, expNums:507, expScores:254, srow:1908289
34823 chr19 566497 566832 wgEncodeRegTfbsClusteredV3 E2F4 score:258, expCount:1, expNums:494, expScores:258, srow:1908290
34823 chr19 566513 566828 wgEncodeRegTfbsClusteredV3 YY1 score:148, expCount:1, expNums:245, expScores:148, srow:1908291
34823 chr19 566513 566754 wgEncodeRegTfbsClusteredV3 E2F6 score:500, expCount:2, expNums:215,495, expScores:500,354, srow:1908292
34823 chr19 566514 566823 wgEncodeRegTfbsClusteredV3 GABPA score:159, expCount:1, expNums:220, expScores:159, srow:1908293
34823 chr19 566521 566796 wgEncodeRegTfbsClusteredV3 ELF1 score:237, expCount:1, expNums:217, expScores:237, srow:1908294
34823 chr19 566529 566772 wgEncodeRegTfbsClusteredV3 EGR1 score:225, expCount:1, expNums:216, expScores:225, srow:1908295
34823 chr19 566538 566655 wgEncodeRegTfbsClusteredV3 CBX3 score:418, expCount:1, expNums:211, expScores:418, srow:1908296
34823 chr19 566541 566850 wgEncodeRegTfbsClusteredV3 GATA1 score:155, expCount:1, expNums:497, expScores:155, srow:1908297
34823 chr19 566552 566715 wgEncodeRegTfbsClusteredV3 ZBTB7A score:263, expCount:1, expNums:247, expScores:263, srow:1908298
34823 chr19 566558 566698 wgEncodeRegTfbsClusteredV3 TEAD4 score:821, expCount:1, expNums:240, expScores:821, srow:1908299

Omics Overlaps

Dmrid Omic Set Data Plot
34823 cellmeth_recounts PrEC: 17, LNCaP: 58, DU145: 0
34823 cellmeth_diffreps_PrECvsDU145 A=11, B=0, Length=240, Event=Down, log2FC=-Inf, padj=0.00313959514768542
34823 cellmeth_diffreps_PrECvsDU145 A=17, B=0, Length=360, Event=Down, log2FC=-Inf, padj=7.41301388411866e-05
34823 cellmeth_diffreps_LNCaPvsDU145 A=51.31, B=0, Length=840, Event=Down, log2FC=-Inf, padj=0